C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog gene family, member J
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046768 Rhoj 10090 + 12:75308322-75401456 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055390 Rhoj-001 75308322-75401456 protein_coding
  ENSMUST00000118602 Rhoj-003 75308322-75395817 protein_coding
  ENSMUST00000118966 Rhoj-002 75308322-75397956 protein_coding
  ENSMUST00000146096 Rhoj-004 75308673-75375648 retained_intron
  ENSMUST00000172981 Rhoj-005 75308881-75400212 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055390ENSMUST00000118602ENSMUST00000118966ENSMUST00000146096ENSMUST00000172981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055390 34.649±9.02 11.783±2.30 54.971±0.34 3.330±2.47 30.230±3.64 20.740±1.91 15.606±1.39 8.433±0.59 2.518±0.92 49.970±4.26 3.974±0.63 38.177±15.61 4.025±2.56 1.018±0.55
ENSMUST00000118602 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.02 1.023±0.12 N/A N/A
ENSMUST00000146096 N/A 12.163±3.48 N/A N/A N/A 15.478±0.00 N/A N/A N/A N/A N/A 36.917±6.24 3.274±0.00 N/A
ENSMUST00000172981 58.340±15.37 12.315±0.42 N/A 1.215±0.00 43.577±7.18 27.162±1.88 25.788±0.53 12.276±0.82 2.087±0.23 70.526±7.42 N/A 56.581±7.63 4.205±0.00 1.392±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SH CIL_0006SH_0003 CGP 12:74897217-75401456
CIL_0000S2 CIL_0000S2_0002 CGP 12:75308322-75416781

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005886 IEA plasma membrane
GO:0006184 ISS GTP catabolic process
GO:0007266 IDA Rho protein signal transduction
GO:0008360 IDA regulation of cell shape
GO:0016020 IEA membrane
GO:0030036 IDA actin cytoskeleton organization
GO:0061299 IMP retina vasculature morphogenesis in camera-type eye
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020250 rhoj ras homolog gene family, member J protein_coding Danio_rerio
ENSG00000126785 RHOJ ras homolog family member J protein_coding Homo_sapiens

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