C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase A2, group IVF
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046971 Pla2g4f 10090 - 2:120299957-120314165 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054651 Pla2g4f-001 120299966-120314165 protein_coding
  ENSMUST00000142183 Pla2g4f-002 120299957-120312377 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054651ENSMUST00000142183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054651 0.059±0.01 N/A 0.367±0.00 0.023±0.00 0.313±0.11 4.080±0.68 N/A 0.086±0.03 0.042±0.03 2.132±1.75 0.068±0.05 0.265±0.12 7.169±4.27 0.041±0.00
ENSMUST00000142183 0.027±0.00 0.025±0.00 N/A 0.023±0.00 0.397±0.00 N/A 0.036±0.03 0.023±0.00 0.033±0.03 N/A 0.022±0.00 0.367±0.25 6.626±6.46 0.161±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PO CIL_0005PO_0002 CGP 2:120265595-120314165
CIL_0005PN CIL_0005PN_0002 CGP 2:120299957-120353137

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001516 IDA prostaglandin biosynthetic process
GO:0004622 IDA lysophospholipase activity
GO:0004623 IDA phospholipase A2 activity
GO:0005737 IDA cytoplasm
GO:0005764 IEA lysosome
GO:0005829 IDA cytosol
GO:0009395 IEA phospholipid catabolic process
GO:0015908 IDA fatty acid transport
GO:0031982 IDA vesicle
GO:0032587 IDA ruffle membrane
GO:0046872 IEA metal ion binding
GO:0047498 IDA calcium-dependent phospholipase A2 activity
GO:0050482 IDA arachidonic acid secretion
GO:0071236 IDA cellular response to antibiotic
GO:0071407 IDA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056535 PLA2G4F (1 of 2) phospholipase A2, group IVF protein_coding Danio_rerio
ENSDARG00000070953 PLA2G4F (2 of 2) phospholipase A2, group IVF protein_coding Danio_rerio
ENSG00000168907 PLA2G4F phospholipase A2, group IVF protein_coding Homo_sapiens

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