C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase A2, group IVF
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142183 Pla2g4f-002 ENSMUSG00000046971 10090 - 2:120299957-120312377 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000142183
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000142183 0.027±0.00 0.025±0.00 0.023±0.00 0.397±0.00 0.036±0.03 0.023±0.00 0.033±0.03 0.022±0.00 0.367±0.25 6.626±6.46 0.161±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PO CIL_0005PO_0002 CGP 2:120265595-120314165
CIL_0005PN CIL_0005PN_0002 CGP 2:120299957-120353137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290497 PLA2G4F-003 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000397272 PLA2G4F-001 protein_coding Homo_sapiens 0 761
ENST00000561893 PLA2G4F-008 retained_intron Homo_sapiens 0 259
ENST00000562320 PLA2G4F-005 nonsense_mediated_decay Homo_sapiens 2e-21 108
ENST00000569985 PLA2G4F-002 nonsense_mediated_decay Homo_sapiens 0 761

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