C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054697 Yipf6-001 ENSMUSG00000047694 10090 + X:98937761-98949017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054697
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054697 3.416±1.64 2.967±0.80 6.051±2.61 4.719±1.60 2.814±1.05 4.744±1.38 3.074±0.16 3.278±0.85 2.911±1.40 7.403±2.83 0.608±0.12 1.649±0.58 1.830±0.55 1.583±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SQ CIL_0001SQ_0003 CGP X:98554277-98949017
CIL_0000YH CIL_0000YH_0003 CGP X:98936316-99074728

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IDA cis-Golgi network
GO:0005802 IDA trans-Golgi network
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030134 IDA ER to Golgi transport vesicle
GO:0042802 IDA identical protein binding
GO:0060576 IMP intestinal epithelial cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374622 YIPF6-201 protein_coding Homo_sapiens 1.99965e-42 180
ENST00000462683 YIPF6-001 protein_coding Homo_sapiens 1.99965e-42 180

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