C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047921 Trappc9 10090 - 15:72589621-73061204 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023276 Trappc9-201 72589621-73055812 protein_coding
  ENSMUST00000089770 Trappc9-202 72589621-73061204 protein_coding
  ENSMUST00000168191 Trappc9-203 72852169-73061204 protein_coding
  ENSMUST00000170633 Trappc9-204 72799524-73061204 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023276ENSMUST00000089770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023276 N/A 9.063±0.78 1.847±0.09 N/A 4.080±0.16 3.115±0.94 N/A 3.657±0.46 1.064±0.53 N/A 4.687±1.45 4.074±1.14 1.239±0.12 N/A
ENSMUST00000089770 10.324±0.96 19.909±1.52 6.762±0.50 8.836±2.01 10.681±4.16 6.492±1.04 5.876±0.74 11.341±2.98 2.002±0.88 8.729±0.84 3.114±1.30 17.509±3.36 4.225±1.24 19.307±6.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q0 CIL_0004Q0_0002 CGP 15:72512119-73061204
CIL_0002Y5 CIL_0002Y5_0002 CGP 15:72589621-73097554

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076113 trappc9 trafficking protein particle complex 9 protein_coding Danio_rerio
ENSDARG00000094353 TRAPPC9 (2 of 2) trafficking protein particle complex 9 protein_coding Danio_rerio
ENSG00000167632 TRAPPC9 trafficking protein particle complex 9 protein_coding Homo_sapiens

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