C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089770 Trappc9-202 ENSMUSG00000047921 10090 - 15:72589621-73061204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089770 10.324±0.96 19.909±1.52 6.762±0.50 8.836±2.01 10.681±4.16 6.492±1.04 5.876±0.74 11.341±2.98 2.002±0.88 8.729±0.84 3.114±1.30 17.509±3.36 4.225±1.24 19.307±6.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q0 CIL_0004Q0_0002 CGP 15:72512119-73061204
CIL_0002Y5 CIL_0002Y5_0002 CGP 15:72589621-73097554

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389328 TRAPPC9-001 protein_coding Homo_sapiens 0 3262
ENST00000438773 TRAPPC9-002 protein_coding Homo_sapiens 0 3273
ENST00000520857 TRAPPC9-003 protein_coding Homo_sapiens 0 2913
ENST00000521167 TRAPPC9-006 processed_transcript Homo_sapiens 0 416
ENST00000521667 TRAPPC9-004 processed_transcript Homo_sapiens 0 1646
ENST00000523777 TRAPPC9-010 processed_transcript Homo_sapiens 0 588
ENST00000524162 TRAPPC9-011 processed_transcript Homo_sapiens 0 481

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