C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOL1/NOP2/Sun domain family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050312 Nsun3 10090 - 16:62732444-62786818 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063089 Nsun3-001 62732444-62786777 protein_coding
  ENSMUST00000143314 Nsun3-002 62732444-62786777 nonsense_mediated_decay
  ENSMUST00000151583 Nsun3-006 62776166-62786818 processed_transcript
  ENSMUST00000152553 Nsun3-004 62770692-62786766 protein_coding
  ENSMUST00000152842 Nsun3-003 62779251-62786713 processed_transcript
  ENSMUST00000156676 Nsun3-005 62735161-62767123 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063089ENSMUST00000143314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063089 1.604±0.24 1.275±0.50 1.158±0.19 0.685±0.25 1.398±0.31 1.172±0.40 0.421±0.13 1.215±0.27 1.502±0.55 0.971±0.42 0.913±0.17 1.165±0.66 0.869±0.52 1.155±0.56
ENSMUST00000143314 1.475±0.54 1.129±0.44 2.043±0.28 1.132±0.58 1.984±0.74 2.371±0.84 0.892±0.13 2.341±0.77 1.590±0.73 1.751±0.23 1.037±0.21 1.950±0.84 1.101±0.30 0.833±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VB CIL_0007VB_0002 VISTA 16:62168252-62770783

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013023 nsun3 NOP2/Sun domain family, member 3 protein_coding Danio_rerio
ENSG00000178694 NSUN3 NOP2/Sun domain family, member 3 protein_coding Homo_sapiens

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