C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOL1/NOP2/Sun domain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063089 Nsun3-001 ENSMUSG00000050312 10090 - 16:62732444-62786777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063089 1.604±0.24 1.275±0.50 1.158±0.19 0.685±0.25 1.398±0.31 1.172±0.40 0.421±0.13 1.215±0.27 1.502±0.55 0.971±0.42 0.913±0.17 1.165±0.66 0.869±0.52 1.155±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VB CIL_0007VB_0002 VISTA 16:62168252-62770783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314622 NSUN3-001 protein_coding Homo_sapiens 0 1018
ENST00000461625 NSUN3-004 processed_transcript Homo_sapiens 3e-24 115
ENST00000468555 NSUN3-005 processed_transcript Homo_sapiens 0 202
ENST00000476588 NSUN3-002 retained_intron Homo_sapiens 0 462
ENST00000483378 NSUN3-007 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000485793 NSUN3-006 processed_transcript Homo_sapiens 8e-38 161

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