C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOL1/NOP2/Sun domain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143314 Nsun3-002 ENSMUSG00000050312 10090 - 16:62732444-62786777 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143314 1.475±0.54 1.129±0.44 2.043±0.28 1.132±0.58 1.984±0.74 2.371±0.84 0.892±0.13 2.341±0.77 1.590±0.73 1.751±0.23 1.037±0.21 1.950±0.84 1.101±0.30 0.833±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VB CIL_0007VB_0002 VISTA 16:62168252-62770783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314622 NSUN3-001 protein_coding Homo_sapiens 0 643
ENST00000461625 NSUN3-004 processed_transcript Homo_sapiens 3e-24 115
ENST00000468555 NSUN3-005 processed_transcript Homo_sapiens 6e-33 145
ENST00000476588 NSUN3-002 retained_intron Homo_sapiens 2e-37 161
ENST00000483378 NSUN3-007 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000485793 NSUN3-006 processed_transcript Homo_sapiens 8e-38 161

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