C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trans-golgi network vesicle protein 23A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051118 Tvp23a-001 ENSMUSG00000050908 10090 - 16:10420557-10447362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000051118
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000051118 3.663±1.84 2.586±1.19 10.898±6.54 1.992±0.00 0.820±0.02 1.501±0.16 2.009±0.76 2.183±0.00 0.405±0.04 1.804±0.02 0.677±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0002 CGP 16:10357948-10424428
CIL_00074Z CIL_00074Z_0002 CGP 16:10411948-10447362
CIL_000750 CIL_000750_0002 CGP 16:10420557-10527564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299866 TVP23A-001 protein_coding Homo_sapiens 0 673
ENST00000572980 TVP23A-007 processed_transcript Homo_sapiens 0 582
ENST00000573360 TVP23A-004 nonsense_mediated_decay Homo_sapiens 0 584
ENST00000575135 TVP23A-006 nonsense_mediated_decay Homo_sapiens 0 671
ENST00000612195 TVP23A-201 protein_coding Homo_sapiens 0 671
ENST00000619408 TVP23A-010 protein_coding Homo_sapiens 0 462

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