C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prefoldin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052033 Pfdn4 10090 + 2:170496428-170519123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063682 Pfdn4-001 170511235-170519123 protein_coding
  ENSMUST00000075087 Pfdn4-006 170496428-170519067 protein_coding
  ENSMUST00000109147 Pfdn4-007 170512558-170518718 protein_coding
  ENSMUST00000109148 Pfdn4-003 170511520-170519123 protein_coding
  ENSMUST00000136839 Pfdn4-004 170511445-170518862 protein_coding
  ENSMUST00000139328 Pfdn4-005 170514890-170516633 protein_coding
  ENSMUST00000170167 Pfdn4-008 170511560-170518711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000063682ENSMUST00000109147ENSMUST00000109148ENSMUST00000136839ENSMUST00000139328ENSMUST00000170167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063682 1.483±0.40 N/A 11.797±2.94 19.996±2.43 1.009±0.25 0.816±0.00 0.868±0.31 8.944±9.40 1.462±0.02 2.633±0.68 N/A 26.380±1.19 2.129±0.61
ENSMUST00000109147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.170±0.00 N/A N/A
ENSMUST00000109148 N/A N/A N/A N/A N/A 2.007±0.00 0.727±0.06 3.788±4.52 1.534±0.23 2.261±0.67 9.015±5.35 9.184±7.51 0.730±0.35
ENSMUST00000136839 2.084±0.74 2.641±0.00 N/A 7.609±4.42 1.535±0.44 2.235±0.14 1.463±0.26 6.141±6.07 2.239±0.00 2.190±0.39 12.117±7.98 15.776±12.69 3.691±1.61
ENSMUST00000139328 0.795±0.00 N/A N/A N/A 0.429±0.06 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170167 N/A N/A N/A 12.272±0.00 N/A N/A N/A N/A N/A N/A 10.660±0.00 15.222±8.29 5.939±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145
CIL_0001HH CIL_0001HH_0002 CGP 2:170482708-170519123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006457 IEA protein folding
GO:0008150 ND biological_process
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061228 pfdn4 prefoldin subunit 4 protein_coding Danio_rerio
ENSG00000101132 PFDN4 prefoldin subunit 4 protein_coding Homo_sapiens

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