C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prefoldin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063682 Pfdn4-001 ENSMUSG00000052033 10090 + 2:170511235-170519123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMusclePlacentaTestisENSMUST00000063682
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Placenta Testis
ENSMUST00000063682 1.483±0.40 11.797±2.94 19.996±2.43 1.009±0.25 0.816±0.00 0.868±0.31 8.944±9.40 1.462±0.02 2.633±0.68 26.380±1.19 2.129±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145
CIL_0001HH CIL_0001HH_0002 CGP 2:170482708-170519123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006457 IEA protein folding
GO:0008150 ND biological_process
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371419 PFDN4-001 protein_coding Homo_sapiens 0 765
ENST00000438379 AC006028.11-001 processed_pseudogene Homo_sapiens 0 348
ENST00000441080 PFDN4-005 nonsense_mediated_decay Homo_sapiens 0 440

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