C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prefoldin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136839 Pfdn4-004 ENSMUSG00000052033 10090 + 2:170511445-170518862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000136839
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000136839 2.084±0.74 2.641±0.00 7.609±4.42 1.535±0.44 2.235±0.14 1.463±0.26 6.141±6.07 2.239±0.00 2.190±0.39 12.117±7.98 15.776±12.69 3.691±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145
CIL_0001HH CIL_0001HH_0002 CGP 2:170482708-170519123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006457 IEA protein folding
GO:0008150 ND biological_process
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371419 PFDN4-001 protein_coding Homo_sapiens 0 446
ENST00000438379 AC006028.11-001 processed_pseudogene Homo_sapiens 0 292
ENST00000441080 PFDN4-005 nonsense_mediated_decay Homo_sapiens 0 372

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