C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine-6-phosphate deaminase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063814 Gnpda1-001 ENSMUSG00000052102 10090 - 18:38327558-38339003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063814 9.355±2.39 18.851±7.35 7.218±0.93 3.787±2.07 6.732±1.32 10.399±3.32 5.282±1.66 72.428±5.09 14.381±4.33 5.980±0.79 3.564±0.56 15.066±3.74 33.137±30.29 13.514±6.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q5 CIL_0006Q5_0002 CGP 18:38296635-38339003
CIL_00062Z CIL_00062Z_0003 CGP 18:38327558-38464399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004342 ISS glucosamine-6-phosphate deaminase activity
GO:0005737 IDA cytoplasm
GO:0006002 ISA fructose 6-phosphate metabolic process
GO:0006041 ISA glucosamine metabolic process
GO:0006043 ISS glucosamine catabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0006091 ISS generation of precursor metabolites and energy
GO:0007340 TAS acrosome reaction
GO:0016787 IEA hydrolase activity
GO:0046370 ISA fructose biosynthetic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311337 GNPDA1-001 protein_coding Homo_sapiens 0 1194
ENST00000500692 GNPDA1-002 protein_coding Homo_sapiens 0 1188
ENST00000503229 GNPDA1-007 protein_coding Homo_sapiens 0 532
ENST00000503794 GNPDA1-004 protein_coding Homo_sapiens 0 1188
ENST00000504139 GNPDA1-014 protein_coding Homo_sapiens 0 702
ENST00000505689 GNPDA1-012 protein_coding Homo_sapiens 0 913
ENST00000507107 GNPDA1-009 retained_intron Homo_sapiens 0 532
ENST00000508177 GNPDA1-003 protein_coding Homo_sapiens 0 1188
ENST00000510194 GNPDA1-006 protein_coding Homo_sapiens 0 638
ENST00000513454 GNPDA1-013 protein_coding Homo_sapiens 0 1018

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