C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178774 Rps10-201 ENSMUSG00000052146 10090 - 17:27630465-27634475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000178774
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000178774 85.249±52.34 373.572±6.05 365.173±107.23 402.704±40.39 37.011±9.12 134.867±31.19 116.349±8.02 184.741±44.36 387.960±145.05 458.284±156.18 21.181±3.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0003 CGP 17:27579382-27636629
CIL_0004LP CIL_0004LP_0003 CGP 17:27630422-27711106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 ISS nucleolus
GO:0005840 IEA ribosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326199 RPS10-001 protein_coding Homo_sapiens 0 673
ENST00000344700 RPS10-005 protein_coding Homo_sapiens 0 604
ENST00000393266 RP11-212P7.1-001 processed_pseudogene Homo_sapiens 6e-32 141
ENST00000408001 RP3-375P9.2-001 processed_pseudogene Homo_sapiens 0 601
ENST00000439253 RPS10P3-001 processed_pseudogene Homo_sapiens 0 603
ENST00000453641 RP11-65N13.6-001 processed_pseudogene Homo_sapiens 0 326
ENST00000460492 RP11-464D20.2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000464218 RPS10-004 processed_transcript Homo_sapiens 0 673
ENST00000467531 RPS10-003 processed_transcript Homo_sapiens 0 673
ENST00000467930 RP11-425L10.1-001 processed_pseudogene Homo_sapiens 0 662
ENST00000469528 GAPVD1-018 processed_transcript Homo_sapiens 6e-27 124
ENST00000471205 RP11-215P8.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000480396 RPS10P28-001 processed_pseudogene Homo_sapiens 0 566
ENST00000480942 RPS10-006 processed_transcript Homo_sapiens 0 449
ENST00000482594 RP11-134G8.6-001 transcribed_processed_pseudogene Homo_sapiens 0 564
ENST00000483812 RPS10P16-001 unprocessed_pseudogene Homo_sapiens 0 555
ENST00000485426 RP11-435F17.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000492704 RPS10L-001 processed_pseudogene Homo_sapiens 0 359
ENST00000494077 RPS10-002 processed_transcript Homo_sapiens 0 673
ENST00000494130 RPS10P20-001 transcribed_processed_pseudogene Homo_sapiens 0 457
ENST00000495588 GAPVD1-004 processed_transcript Homo_sapiens 9e-28 126
ENST00000508621 RP11-366M4.17-001 processed_pseudogene Homo_sapiens 0 322
ENST00000548913 C12orf54-005 processed_transcript Homo_sapiens 0 483
ENST00000586795 RPS10P27-001 processed_pseudogene Homo_sapiens 0 499
ENST00000604757 GS1-21A4.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000605528 RPS10-NUDT3-001 protein_coding Homo_sapiens 0 604
ENST00000621356 RPS10-201 protein_coding Homo_sapiens 0 673

Loading