C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB4B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053291 Rab4b 10090 - 7:27168424-27178896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093040 Rab4b-001 27168424-27178896 protein_coding
  ENSMUST00000128409 Rab4b-005 27175797-27178876 processed_transcript
  ENSMUST00000131278 Rab4b-008 27172399-27174512 processed_transcript
  ENSMUST00000131420 Rab4b-004 27172710-27174459 processed_transcript
  ENSMUST00000134462 Rab4b-002 27168427-27178815 retained_intron
  ENSMUST00000141906 Rab4b-007 27175828-27178823 processed_transcript
  ENSMUST00000152753 Rab4b-006 27168695-27178888 processed_transcript
  ENSMUST00000153511 Rab4b-003 27168426-27178810 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093040ENSMUST00000134462ENSMUST00000152753ENSMUST00000153511
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093040 27.321±2.87 40.777±9.54 25.309±4.16 21.400±4.58 31.767±13.90 35.507±6.64 8.149±1.54 22.114±3.43 12.464±1.84 29.682±4.72 3.148±0.87 29.675±8.06 11.253±3.75 32.034±1.76
ENSMUST00000134462 5.364±0.41 N/A 8.228±2.22 4.639±0.99 4.792±1.88 6.704±0.78 1.658±0.00 3.802±0.16 2.231±0.23 5.491±0.50 1.274±0.45 8.099±1.31 2.487±0.57 N/A
ENSMUST00000152753 N/A 12.108±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.817±0.46 N/A N/A
ENSMUST00000153511 N/A N/A N/A 69.053±0.00 N/A N/A N/A N/A N/A N/A N/A 29.249±0.00 22.914±2.36 25.299±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012177 rab4b RAB4B, member RAS oncogene family protein_coding Danio_rerio
ENSG00000167578 RAB4B RAB4B, member RAS oncogene family protein_coding Homo_sapiens
ENSG00000171570 RAB4B-EGLN2 RAB4B-EGLN2 readthrough (NMD candidate) protein_coding Homo_sapiens

Loading