C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110686 Tmem62-003 ENSMUSG00000054484 10090 + 2:120977533-121007644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110686
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110686 1.142±0.14 3.401±0.00 0.638±0.12 2.184±0.43 1.157±0.00 1.407±0.00 0.602±0.04 1.007±0.12 0.816±0.60 1.440±0.22 0.474±0.21 1.815±0.53 1.518±1.23 0.354±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0002 CGP 2:120977017-121016904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260403 TMEM62-001 protein_coding Homo_sapiens 0 1991
ENST00000564494 TMEM62-002 protein_coding Homo_sapiens 0 1297
ENST00000564698 TMEM62-012 protein_coding Homo_sapiens 0 529
ENST00000565291 TMEM62-004 protein_coding Homo_sapiens 0 418
ENST00000567441 TMEM62-007 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000568182 TMEM62-008 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000568197 TMEM62-009 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000569535 TMEM62-005 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000569897 TMEM62-013 retained_intron Homo_sapiens 0 370
ENST00000569926 TMEM62-006 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000570109 TMEM62-010 retained_intron Homo_sapiens 0 357

Loading