C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 2, subfamily c, polypeptide 50
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054827 Cyp2c50 10090 + 19:40089688-40113950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068094 Cyp2c50-002 40089688-40113950 protein_coding
  ENSMUST00000080171 Cyp2c50-001 40089696-40113950 protein_coding
  ENSMUST00000124391 Cyp2c50-003 40089735-40092322 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000068094ENSMUST00000080171ENSMUST00000124391
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000068094 0.036±0.01 0.147±0.00 N/A N/A 0.129±0.02 0.073±0.05 132.103±115.32 0.089±0.00 0.061±0.00 0.399±0.00 0.048±0.00
ENSMUST00000080171 N/A N/A 2.283±0.34 0.054±0.00 N/A 0.032±0.00 236.660±142.27 0.029±0.00 N/A 0.234±0.09 N/A
ENSMUST00000124391 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000R CGP 19:40037941-40113950
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007H6 CIL_0007H6_000N CGP 19:40089688-40187333

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0008392 IDA arachidonic acid epoxygenase activity
GO:0016020 IEA membrane
GO:0019369 IDA arachidonic acid metabolic process
GO:0020037 IEA heme binding
GO:0043651 IDA linoleic acid metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity
GO:0071614 IDA linoleic acid epoxygenase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007173 cyp2y3 cytochrome P450, family 2, subfamily Y, polypeptide 3 protein_coding Danio_rerio
ENSDARG00000068493 si:zfos-411a11.2 si:zfos-411a11.2 protein_coding Danio_rerio
ENSG00000138109 CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9 protein_coding Homo_sapiens
ENSG00000138115 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 protein_coding Homo_sapiens
ENSG00000165841 CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 protein_coding Homo_sapiens

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