C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle associated 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055612 Cdca7 10090 + 2:72476159-72486893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102691 Cdca7-001 72476159-72486893 protein_coding
  ENSMUST00000127344 Cdca7-004 72476390-72481860 processed_transcript
  ENSMUST00000130730 Cdca7-002 72483564-72484743 processed_transcript
  ENSMUST00000137880 Cdca7-003 72485107-72486202 processed_transcript
  ENSMUST00000157019 Cdca7-005 72476253-72482497 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102691ENSMUST00000127344ENSMUST00000130730ENSMUST00000137880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102691 4.567±4.21 0.424±0.22 7.128±0.38 12.493±10.41 1.629±0.51 5.537±2.81 0.362±0.17 0.317±0.08 11.748±12.22 1.489±0.26 0.150±0.09 5.939±2.70 12.009±6.35 1.574±0.38
ENSMUST00000127344 N/A 0.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130730 N/A N/A N/A 2.086±0.00 N/A N/A N/A 0.404±0.00 N/A N/A 0.077±0.00 13.484±0.00 21.400±0.00 N/A
ENSMUST00000137880 5.997±5.31 0.461±0.25 4.874±0.77 7.603±5.42 3.155±2.30 5.410±1.10 0.637±0.18 0.627±0.18 7.319±7.35 2.240±0.59 0.102±0.00 6.738±2.69 12.457±8.61 1.439±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JV CIL_0008JV_0002 VISTA 2:72126155-72727698
CIL_0004KE CIL_0004KE_0002 CGP 2:72285637-72486893
CIL_0007OE CIL_0007OE_0002 UCNEbase 2:72378722-73287933
CIL_0004JD CIL_0004JD_0002 CGP 2:72476159-72980446

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0042127 IEA regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077620 cdca7a cell division cycle associated 7a protein_coding Danio_rerio
ENSG00000144354 CDCA7 cell division cycle associated 7 protein_coding Homo_sapiens

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