C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglucomutase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056131 Pgm3 10090 - 9:86554377-86571842 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070064 Pgm3-001 86554377-86571827 protein_coding
  ENSMUST00000072585 Pgm3-003 86555001-86571828 protein_coding
  ENSMUST00000186193 Pgm3-004 86555681-86571793 retained_intron
  ENSMUST00000187251 Pgm3-002 86556523-86571842 retained_intron
  ENSMUST00000190924 Pgm3-005 86555256-86557940 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070064ENSMUST00000072585ENSMUST00000186193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070064 4.198±0.50 5.527±1.20 4.744±0.61 6.290±1.43 3.851±0.25 6.552±0.84 1.939±0.16 7.474±1.03 4.859±1.36 5.664±0.48 1.027±0.30 6.683±1.76 9.001±3.96 4.624±0.02
ENSMUST00000072585 N/A N/A N/A N/A N/A 4.873±0.34 N/A N/A N/A N/A N/A N/A 10.636±0.18 N/A
ENSMUST00000186193 N/A N/A N/A 5.873±0.00 N/A N/A N/A N/A 2.914±0.15 N/A N/A 6.472±1.94 8.749±2.26 5.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000673 CIL_000673_0002 CGP 9:86307306-86555923
CIL_000672 CIL_000672_0002 CGP 9:86467154-86571842
CIL_000671 CIL_000671_0002 CGP 9:86554377-86574899

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004610 ISS phosphoacetylglucosamine mutase activity
GO:0004614 IDA phosphoglucomutase activity
GO:0005829 IBA cytosol
GO:0005975 IEA carbohydrate metabolic process
GO:0006048 ISS UDP-N-acetylglucosamine biosynthetic process
GO:0006487 ISS protein N-linked glycosylation
GO:0006493 ISS protein O-linked glycosylation
GO:0007283 IMP spermatogenesis
GO:0019255 IDA glucose 1-phosphate metabolic process
GO:0030097 IMP hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024654 pgm3 phosphoglucomutase 3 protein_coding Danio_rerio
ENSG00000013375 PGM3 phosphoglucomutase 3 protein_coding Homo_sapiens

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