C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglucomutase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070064 Pgm3-001 ENSMUSG00000056131 10090 - 9:86554377-86571827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070064 4.198±0.50 5.527±1.20 4.744±0.61 6.290±1.43 3.851±0.25 6.552±0.84 1.939±0.16 7.474±1.03 4.859±1.36 5.664±0.48 1.027±0.30 6.683±1.76 9.001±3.96 4.624±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000673 CIL_000673_0002 CGP 9:86307306-86555923
CIL_000672 CIL_000672_0002 CGP 9:86467154-86571842
CIL_000671 CIL_000671_0002 CGP 9:86554377-86574899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004610 ISS phosphoacetylglucosamine mutase activity
GO:0004614 IDA phosphoglucomutase activity
GO:0005829 IBA cytosol
GO:0006048 ISS UDP-N-acetylglucosamine biosynthetic process
GO:0006487 ISS protein N-linked glycosylation
GO:0006493 ISS protein O-linked glycosylation
GO:0007283 IMP spermatogenesis
GO:0019255 IDA glucose 1-phosphate metabolic process
GO:0030097 IMP hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237163 DOPEY1-201 protein_coding Homo_sapiens 0 198
ENST00000283977 PGM3-003 protein_coding Homo_sapiens 0 1491
ENST00000349129 DOPEY1-002 protein_coding Homo_sapiens 0 200
ENST00000484282 DOPEY1-003 processed_transcript Homo_sapiens 0 200
ENST00000505470 PGM3-010 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000506587 PGM3-002 protein_coding Homo_sapiens 0 1620
ENST00000507554 PGM3-005 protein_coding Homo_sapiens 0 368
ENST00000510258 PGM3-009 protein_coding Homo_sapiens 0 540
ENST00000512866 PGM3-004 protein_coding Homo_sapiens 0 1570
ENST00000513973 PGM3-001 protein_coding Homo_sapiens 0 1620
ENST00000616566 PGM3-201 protein_coding Homo_sapiens 0 1472

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