C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglucomutase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000013375 PGM3 9606 - 6:83161150-83193936 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283977 PGM3-003 83168528-83193266 protein_coding
  ENST00000503094 PGM3-007 83188745-83193265 protein_coding
  ENST00000504780 PGM3-013 83161150-83172013 nonsense_mediated_decay
  ENST00000505470 PGM3-010 83182950-83193255 nonsense_mediated_decay
  ENST00000506587 PGM3-002 83169123-83193914 protein_coding
  ENST00000507404 PGM3-011 83174437-83176135 retained_intron
  ENST00000507554 PGM3-005 83187025-83193936 protein_coding
  ENST00000508748 PGM3-006 83188617-83193293 protein_coding
  ENST00000509219 PGM3-014 83169521-83175982 protein_coding
  ENST00000510258 PGM3-009 83181762-83193234 protein_coding
  ENST00000512866 PGM3-004 83166130-83193231 protein_coding
  ENST00000513973 PGM3-001 83164873-83193293 protein_coding
  ENST00000515333 PGM3-008 83190510-83193248 retained_intron
  ENST00000605602 PGM3-015 83188503-83188645 protein_coding
  ENST00000616566 PGM3-201 83164873-83193293 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283977ENST00000506587ENST00000512866ENST00000513973ENST00000616566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.611±0.33 N/A
ENST00000506587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.032±0.00 N/A N/A
ENST00000512866 4.706±0.00 N/A N/A N/A 3.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513973 2.803±0.00 2.454±0.00 N/A 3.252±0.00 3.113±0.00 2.403±0.36 1.244±0.58 1.937±0.45 5.262±0.00 2.013±0.00 1.049±0.00 4.483±0.82 4.379±1.24 5.861±0.00
ENST00000616566 N/A N/A 1.326±0.00 N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.287±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000673 CIL_000673_0001 CGP 6:82892398-83171350
CIL_000672 CIL_000672_0001 CGP 6:83067666-83193936
CIL_000671 CIL_000671_0001 CGP 6:83161150-83198932

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004610 IEA phosphoacetylglucosamine mutase activity
GO:0004614 IEA phosphoglucomutase activity
GO:0005575 ND cellular_component
GO:0005829 IBA cytosol
GO:0005975 IEA carbohydrate metabolic process
GO:0006041 NAS glucosamine metabolic process
GO:0006048 IBA UDP-N-acetylglucosamine biosynthetic process
GO:0006487 IMP protein N-linked glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0006493 IMP protein O-linked glycosylation
GO:0007283 IEA spermatogenesis
GO:0016868 IEA intramolecular transferase activity, phosphotransferases
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019255 IEA glucose 1-phosphate metabolic process
GO:0030097 IBA hemopoiesis
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024654 pgm3 phosphoglucomutase 3 protein_coding Danio_rerio
ENSMUSG00000056131 Pgm3 phosphoglucomutase 3 protein_coding Mus_musculus

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