C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000671_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013375-ENSG00000013392 CGP 9606 6:83161150-83198932
GeneTranscriptPositionBiotype
ENSG00000013375 (PGM3)
phosphoglucomutase 3 		ENST00000283977 (PGM3-003) 83168528-83193266 protein_coding
ENST00000503094 (PGM3-007) 83188745-83193265 protein_coding
ENST00000504780 (PGM3-013) 83161150-83172013 nonsense_mediated_decay
ENST00000505470 (PGM3-010) 83182950-83193255 nonsense_mediated_decay
ENST00000506587 (PGM3-002) 83169123-83193914 protein_coding
ENST00000507404 (PGM3-011) 83174437-83176135 retained_intron
ENST00000507554 (PGM3-005) 83187025-83193936 protein_coding
ENST00000508748 (PGM3-006) 83188617-83193293 protein_coding
ENST00000509219 (PGM3-014) 83169521-83175982 protein_coding
ENST00000510258 (PGM3-009) 83181762-83193234 protein_coding
ENST00000512866 (PGM3-004) 83166130-83193231 protein_coding
ENST00000513973 (PGM3-001) 83164873-83193293 protein_coding
ENST00000515333 (PGM3-008) 83190510-83193248 retained_intron
ENST00000605602 (PGM3-015) 83188503-83188645 protein_coding
ENST00000616566 (PGM3-201) 83164873-83193293 protein_coding
ENSG00000013392 (RWDD2A)
RWD domain containing 2A 		ENST00000369724 (RWDD2A-001) 83193379-83198932 protein_coding
ENSG00000083097 (DOPEY1)
dopey family member 1 		ENST00000237163 (DOPEY1-201) 83067666-83168471 protein_coding
ENST00000349129 (DOPEY1-002) 83067666-83168719 protein_coding
ENST00000369739 (DOPEY1-006) 83096729-83168331 protein_coding
ENST00000481979 (DOPEY1-005) 83153392-83154273 retained_intron
ENST00000484282 (DOPEY1-003) 83137676-83171350 processed_transcript
ENST00000493541 (DOPEY1-004) 83130214-83134480 retained_intron
ENST00000604380 (DOPEY1-001) 83122863-83128928 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000671_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056131-ENSMUSG00000032417 CGP 10090 9:86554377-86574899
GeneTranscriptPositionBiotype
ENSMUSG00000032417 (Rwdd2a)
RWD domain containing 2A 		ENSMUST00000034988 (Rwdd2a-001) 86572016-86574899 protein_coding
ENSMUST00000179212 (Rwdd2a-002) 86572053-86574840 protein_coding
ENSMUST00000185566 (Rwdd2a-003) 86571991-86574733 protein_coding
ENSMUSG00000034973 (Dopey1)
dopey family member 1 		ENSMUST00000034987 (Dopey1-201) 86485407-86555806 protein_coding
ENSMUST00000185297 (Dopey1-007) 86521141-86525085 protein_coding
ENSMUST00000185840 (Dopey1-011) 86503644-86507560 retained_intron
ENSMUST00000185919 (Dopey1-005) 86467214-86555804 nonsense_mediated_decay
ENSMUST00000186290 (Dopey1-001) 86467170-86508284 retained_intron
ENSMUST00000186418 (Dopey1-012) 86503936-86516390 retained_intron
ENSMUST00000186715 (Dopey1-016) 86542821-86549117 retained_intron
ENSMUST00000186841 (Dopey1-010) 86489598-86492499 retained_intron
ENSMUST00000187348 (Dopey1-008) 86523492-86546490 retained_intron
ENSMUST00000187427 (Dopey1-018) 86549617-86554630 retained_intron
ENSMUST00000187607 (Dopey1-002) 86467211-86504297 retained_intron
ENSMUST00000188675 (Dopey1-017) 86467211-86513024 protein_coding
ENSMUST00000189564 (Dopey1-014) 86531577-86554625 retained_intron
ENSMUST00000189817 (Dopey1-013) 86533003-86554630 nonsense_mediated_decay
ENSMUST00000190407 (Dopey1-009) 86487264-86490069 retained_intron
ENSMUST00000190834 (Dopey1-006) 86497030-86501000 retained_intron
ENSMUST00000190906 (Dopey1-003) 86467179-86503173 retained_intron
ENSMUST00000190957 (Dopey1-004) 86467154-86555923 protein_coding
ENSMUSG00000056131 (Pgm3)
phosphoglucomutase 3 		ENSMUST00000070064 (Pgm3-001) 86554377-86571827 protein_coding
ENSMUST00000072585 (Pgm3-003) 86555001-86571828 protein_coding
ENSMUST00000186193 (Pgm3-004) 86555681-86571793 retained_intron
ENSMUST00000187251 (Pgm3-002) 86556523-86571842 retained_intron
ENSMUST00000190924 (Pgm3-005) 86555256-86557940 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000671_0001ENSG00000013375ENST00000283977ENST00000503094ENST00000504780ENST00000505470ENST00000506587ENST00000507404ENST00000507554ENST00000508748ENST00000509219ENST00000510258ENST00000512866ENST00000513973ENST00000515333ENST00000605602ENST00000616566ENSG00000013392ENST00000369724ENSG00000083097ENST00000237163ENST00000349129ENST00000369739ENST00000481979ENST00000484282ENST00000493541ENST00000604380CIL_000671_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000671_0001ENSG00000013375ENST00000283977ENST00000506587ENST00000512866ENST00000513973ENST00000616566ENSG00000013392ENST00000369724ENSG00000083097ENST00000237163ENST00000349129ENST00000369739ENST00000484282CIL_000671_0002ENSMUSG00000032417ENSMUST00000034988ENSMUST00000179212ENSMUST00000185566ENSMUSG00000034973ENSMUST00000034987ENSMUST00000187427ENSMUST00000188675ENSMUST00000189564ENSMUST00000189817ENSMUST00000190957ENSMUSG00000056131ENSMUST00000070064ENSMUST00000072585ENSMUST00000186193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013375 ENST00000283977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.611±0.33 N/A
ENST00000503094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.032±0.00 N/A N/A
ENST00000507404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512866 4.706±0.00 N/A N/A N/A 3.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513973 2.803±0.00 2.454±0.00 N/A 3.252±0.00 3.113±0.00 2.403±0.36 1.244±0.58 1.937±0.45 5.262±0.00 2.013±0.00 1.049±0.00 4.483±0.82 4.379±1.24 5.861±0.00
ENST00000515333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616566 N/A N/A 1.326±0.00 N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.287±0.00 N/A N/A N/A
ENSG00000013392 ENST00000369724 1.371±0.00 1.400±0.00 0.482±0.00 3.612±1.65 1.127±0.00 0.713±0.02 0.661±0.35 1.447±0.57 0.711±0.09 0.534±0.31 0.300±0.21 1.047±0.39 0.771±0.10 3.944±0.73
ENSG00000083097 ENST00000237163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.505±0.00 N/A N/A
ENST00000349129 N/A N/A N/A N/A 1.588±0.00 1.563±0.00 N/A 1.277±0.00 N/A N/A 0.385±0.00 N/A N/A N/A
ENST00000369739 1.030±0.00 1.110±0.00 N/A 2.294±0.00 0.818±0.00 0.499±0.00 1.487±0.00 0.976±0.00 N/A N/A 0.527±0.00 1.882±0.41 1.575±0.00 4.061±0.48
ENST00000481979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484282 N/A 1.582±0.00 N/A 1.501±0.00 1.009±0.00 0.612±0.00 N/A 1.405±0.00 N/A 1.380±0.00 0.561±0.00 2.437±0.58 N/A 3.113±0.00
ENST00000493541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032417 ENSMUST00000034988 0.510±0.00 2.806±0.95 N/A 0.670±0.20 0.154±0.00 N/A N/A 0.165±0.00 0.074±0.02 0.167±0.03 0.084±0.03 0.953±0.25 0.383±0.11 4.899±0.51
ENSMUST00000179212 0.226±0.00 11.107±6.21 N/A 4.632±0.00 N/A 0.792±0.43 0.387±0.02 0.406±0.00 0.266±0.15 1.365±0.00 0.137±0.02 2.216±1.22 0.949±0.28 N/A
ENSMUST00000185566 0.963±0.41 1.691±0.40 0.653±0.07 1.672±0.54 1.135±0.46 1.054±0.86 0.150±0.02 0.541±0.18 0.357±0.22 1.046±0.28 0.131±0.02 2.691±1.50 1.360±0.65 24.280±7.00
ENSMUSG00000034973 ENSMUST00000034987 N/A 1.309±0.09 N/A N/A N/A N/A 0.371±0.00 N/A 0.890±0.15 N/A N/A 1.887±0.45 0.698±0.00 N/A
ENSMUST00000185297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187427 N/A 5.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.607±0.00 N/A N/A N/A
ENSMUST00000187607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188675 N/A N/A N/A N/A 3.306±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189564 N/A N/A 4.559±0.71 6.674±0.00 4.379±1.11 3.746±0.00 2.406±0.63 5.418±0.00 N/A 5.677±0.68 1.708±0.21 3.712±0.00 N/A N/A
ENSMUST00000189817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.580±0.00 N/A
ENSMUST00000190407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190957 N/A N/A N/A N/A N/A 2.049±0.08 N/A N/A 0.666±0.00 N/A N/A 1.374±0.00 N/A N/A
ENSMUSG00000056131 ENSMUST00000070064 4.198±0.50 5.527±1.20 4.744±0.61 6.290±1.43 3.851±0.25 6.552±0.84 1.939±0.16 7.474±1.03 4.859±1.36 5.664±0.48 1.027±0.30 6.683±1.76 9.001±3.96 4.624±0.02
ENSMUST00000072585 N/A N/A N/A N/A N/A 4.873±0.34 N/A N/A N/A N/A N/A N/A 10.636±0.18 N/A
ENSMUST00000186193 N/A N/A N/A 5.873±0.00 N/A N/A N/A N/A 2.914±0.15 N/A N/A 6.472±1.94 8.749±2.26 5.410±0.00
ENSMUST00000187251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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