C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147822 Commd7-003 ENSMUSG00000056941 10090 - 2:153618834-153632731 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147822
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147822 2.700±0.75 3.924±1.07 2.999±0.30 2.065±1.07 2.425±0.84 1.551±0.20 1.071±0.38 1.230±0.27 1.057±0.26 2.560±0.77 0.401±0.08 2.764±0.82 1.251±0.27 0.705±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0008NQ CIL_0008NQ_0002 VISTA 2:153260290-153861940
CIL_0008QN CIL_0008QN_0002 VISTA 2:153551282-154154369
CIL_00036W CIL_00036W_0002 CGP 2:153616933-153687730

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278980 COMMD7-001 protein_coding Homo_sapiens 0 584
ENST00000446419 COMMD7-004 protein_coding Homo_sapiens 0 569
ENST00000474815 COMMD7-005 protein_coding Homo_sapiens 0 346
ENST00000610160 COMMD7-003 nonsense_mediated_decay Homo_sapiens 0 457

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