C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pseudouridylate synthase 7 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057541 Pus7 10090 - 5:23740648-23783711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000119946 Pus7-001 23740648-23783711 protein_coding
  ENSMUST00000129848 Pus7-007 23742365-23750112 processed_transcript
  ENSMUST00000131404 Pus7-008 23743422-23762413 nonsense_mediated_decay
  ENSMUST00000131992 Pus7-002 23740656-23779558 protein_coding
  ENSMUST00000147922 Pus7-005 23749378-23762450 processed_transcript
  ENSMUST00000148618 Pus7-003 23740649-23778411 protein_coding
  ENSMUST00000148921 Pus7-006 23750531-23754576 processed_transcript
  ENSMUST00000151449 Pus7-004 23760266-23778378 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119946ENSMUST00000129848ENSMUST00000131404ENSMUST00000148618ENSMUST00000151449
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119946 4.067±3.00 9.480±1.62 3.347±0.68 1.687±0.27 1.335±0.37 1.095±0.21 1.861±0.28 5.340±3.93 1.344±0.14 3.685±0.41 3.975±1.60 7.249±3.14 1.000±0.21
ENSMUST00000129848 N/A N/A N/A N/A N/A N/A N/A 1.390±0.00 N/A N/A 5.770±0.00 N/A N/A
ENSMUST00000131404 N/A N/A N/A 1.407±0.00 2.296±0.47 0.959±0.00 2.286±0.00 1.116±0.00 1.215±0.00 N/A 4.648±0.38 N/A N/A
ENSMUST00000148618 N/A N/A 1.117±0.18 N/A N/A N/A N/A N/A N/A N/A 4.583±1.53 N/A N/A
ENSMUST00000151449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.553±0.00 3.214±1.76 1.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BH CIL_0005BH_0003 CGP 5:23503356-23783711
CIL_00040X CIL_00040X_0002 CGP 5:23740648-23820369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009982 IEA pseudouridine synthase activity
GO:0019899 IEA enzyme binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031774 pus7 pseudouridylate synthase 7 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000091127 PUS7 pseudouridylate synthase 7 (putative) protein_coding Homo_sapiens

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