C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 7 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119946 Pus7-001 ENSMUSG00000057541 10090 - 5:23740648-23783711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119946
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119946 4.067±3.00 9.480±1.62 3.347±0.68 1.687±0.27 1.335±0.37 1.095±0.21 1.861±0.28 5.340±3.93 1.344±0.14 3.685±0.41 3.975±1.60 7.249±3.14 1.000±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BH CIL_0005BH_0003 CGP 5:23503356-23783711
CIL_00040X CIL_00040X_0002 CGP 5:23740648-23820369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356362 PUS7-002 protein_coding Homo_sapiens 0 2019
ENST00000469408 PUS7-001 protein_coding Homo_sapiens 0 2034
ENST00000478208 PUS7-005 retained_intron Homo_sapiens 0 300
ENST00000481939 PUS7-003 nonsense_mediated_decay Homo_sapiens 0 1291
ENST00000482157 PUS7-006 protein_coding Homo_sapiens 0 324
ENST00000487277 PUS7-004 retained_intron Homo_sapiens 0 191

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