C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005BH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029368-ENSDARG00000031774 CGP 7955 25:252910-290037
GeneTranscriptPositionBiotype
ENSDARG00000029368 (SRPK2)
SRSF protein kinase 2 		ENSDART00000021614 (SRPK2-201) 254236-259024 protein_coding
ENSDART00000155033 (SRPK2-001) 252910-280306 protein_coding
ENSDARG00000031774 (pus7)
pseudouridylate synthase 7 homolog (S. cerevisiae) 		ENSDART00000040499 (pus7-201) 281605-290037 protein_coding
ENSDART00000123990 (pus7-001) 281605-290037 protein_coding
ENSDART00000153616 (pus7-003) 281687-284164 protein_coding
ENSDART00000153663 (pus7-002) 282366-286167 protein_coding
CIL_0005BH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135250-ENSG00000091127 CGP 9606 7:105110704-105522267
GeneTranscriptPositionBiotype
ENSG00000005483 (KMT2E)
lysine (K)-specific methyltransferase 2E 		ENST00000257745 (KMT2E-201) 105014190-105114084 protein_coding
ENST00000311117 (KMT2E-001) 105014179-105114085 protein_coding
ENST00000334877 (KMT2E-202) 105014190-105114361 protein_coding
ENST00000334884 (KMT2E-004) 105014190-105114361 nonsense_mediated_decay
ENST00000334914 (KMT2E-203) 105040953-105113333 protein_coding
ENST00000468607 (KMT2E-014) 105062198-105063827 retained_intron
ENST00000473063 (KMT2E-007) 105109040-105110867 protein_coding
ENST00000474203 (KMT2E-012) 105014461-105063377 protein_coding
ENST00000476671 (KMT2E-003) 105014218-105091609 protein_coding
ENST00000478079 (KMT2E-018) 105107900-105110556 nonsense_mediated_decay
ENST00000478990 (KMT2E-009) 105014206-105090132 protein_coding
ENST00000479838 (KMT2E-016) 105101471-105102649 protein_coding
ENST00000480368 (KMT2E-011) 105014207-105040856 processed_transcript
ENST00000482560 (KMT2E-010) 105038126-105090132 nonsense_mediated_decay
ENST00000485619 (KMT2E-013) 105061918-105063386 retained_intron
ENST00000495267 (KMT2E-008) 105014208-105074777 protein_coding
ENST00000496191 (KMT2E-015) 105077116-105077808 retained_intron
ENST00000622386 (KMT2E-204) 105063350-105101478 protein_coding
ENSG00000091127 (PUS7)
pseudouridylate synthase 7 (putative) 		ENST00000356362 (PUS7-002) 105456511-105522258 protein_coding
ENST00000469408 (PUS7-001) 105457659-105522258 protein_coding
ENST00000478208 (PUS7-005) 105470286-105472188 retained_intron
ENST00000481939 (PUS7-003) 105439661-105522267 nonsense_mediated_decay
ENST00000482157 (PUS7-006) 105491586-105508135 protein_coding
ENST00000487277 (PUS7-004) 105491549-105495347 retained_intron
ENSG00000135250 (SRPK2)
SRSF protein kinase 2 		ENST00000357311 (SRPK2-001) 105116377-105269015 protein_coding
ENST00000393651 (SRPK2-008) 105116376-105388894 protein_coding
ENST00000460391 (SRPK2-013) 105167377-105388894 protein_coding
ENST00000462282 (SRPK2-010) 105203627-105399308 processed_transcript
ENST00000465072 (SRPK2-003) 105115269-105132793 nonsense_mediated_decay
ENST00000465112 (SRPK2-009) 105203694-105388898 nonsense_mediated_decay
ENST00000466917 (SRPK2-004) 105117296-105144066 retained_intron
ENST00000474770 (SRPK2-006) 105117580-105133068 protein_coding
ENST00000476117 (SRPK2-012) 105160301-105203732 retained_intron
ENST00000477925 (SRPK2-007) 105117388-105142336 protein_coding
ENST00000482862 (SRPK2-015) 105203723-105389390 processed_transcript
ENST00000482897 (SRPK2-014) 105160545-105389391 protein_coding
ENST00000485455 (SRPK2-011) 105117349-105203656 processed_transcript
ENST00000489828 (SRPK2-002) 105117526-105298779 protein_coding
ENST00000493638 (SRPK2-005) 105110704-105117479 processed_transcript
ENSG00000201179 (RNU6-1322P)
RNA, U6 small nuclear 1322, pseudogene 		ENST00000364309 (RNU6-1322P-201) 105332790-105332896 snRNA
ENSG00000213361 (RP4-778K6.1)
 ENST00000393647 (RP4-778K6.1-001) 105244652-105244970 processed_pseudogene
ENSG00000244490 (RWDD4P1)
RWD domain containing 4 pseudogene 1 		ENST00000488019 (RWDD4P1-001) 105301522-105302086 processed_pseudogene
ENSG00000270764 (CTB-152G17.5)
 ENST00000603744 (CTB-152G17.5-001) 105189190-105189814 processed_pseudogene
ENSG00000271482 (CTB-152G17.4)
 ENST00000604391 (CTB-152G17.4-001) 105204600-105204859 processed_pseudogene
CIL_0005BH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062604-ENSMUSG00000057541 CGP 10090 5:23503356-23783711
GeneTranscriptPositionBiotype
ENSMUSG00000029004 (Kmt2e)
lysine (K)-specific methyltransferase 2E 		ENSMUST00000094962 (Kmt2e-001) 23434441-23504235 protein_coding
ENSMUST00000115128 (Kmt2e-002) 23434449-23504235 protein_coding
ENSMUST00000126586 (Kmt2e-004) 23492421-23500487 nonsense_mediated_decay
ENSMUST00000146375 (Kmt2e-003) 23485501-23496208 processed_transcript
ENSMUSG00000057541 (Pus7)
pseudouridylate synthase 7 homolog (S. cerevisiae) 		ENSMUST00000119946 (Pus7-001) 23740648-23783711 protein_coding
ENSMUST00000129848 (Pus7-007) 23742365-23750112 processed_transcript
ENSMUST00000131404 (Pus7-008) 23743422-23762413 nonsense_mediated_decay
ENSMUST00000131992 (Pus7-002) 23740656-23779558 protein_coding
ENSMUST00000147922 (Pus7-005) 23749378-23762450 processed_transcript
ENSMUST00000148618 (Pus7-003) 23740649-23778411 protein_coding
ENSMUST00000148921 (Pus7-006) 23750531-23754576 processed_transcript
ENSMUST00000151449 (Pus7-004) 23760266-23778378 nonsense_mediated_decay
ENSMUSG00000062604 (Srpk2)
serine/arginine-rich protein specific kinase 2 		ENSMUST00000088392 (Srpk2-201) 23503356-23616571 protein_coding
ENSMUSG00000088359 (Gm24009)
predicted gene, 24009 		ENSMUST00000157734 (Gm24009-201) 23674289-23674381 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BH_0001ENSDARG00000029368ENSDART00000021614ENSDART00000155033ENSDARG00000031774ENSDART00000040499ENSDART00000123990ENSDART00000153616ENSDART00000153663CIL_0005BH_0002ENSG00000005483ENST00000257745ENST00000311117ENST00000334877ENST00000334884ENST00000334914ENST00000468607ENST00000473063ENST00000474203ENST00000476671ENST00000478079ENST00000478990ENST00000479838ENST00000480368ENST00000482560ENST00000485619ENST00000495267ENST00000496191ENST00000622386ENSG00000091127ENST00000356362ENST00000469408ENST00000478208ENST00000481939ENST00000482157ENST00000487277ENSG00000135250ENST00000357311ENST00000393651ENST00000460391ENST00000462282ENST00000465072ENST00000465112ENST00000466917ENST00000474770ENST00000476117ENST00000477925ENST00000482862ENST00000482897ENST00000485455ENST00000489828ENST00000493638ENSG00000201179ENST00000364309ENSG00000213361ENST00000393647ENSG00000244490ENST00000488019ENSG00000270764ENST00000603744ENSG00000271482ENST00000604391CIL_0005BH_0003ENSMUSG00000029004ENSMUST00000094962ENSMUST00000115128ENSMUST00000126586ENSMUST00000146375ENSMUSG00000057541ENSMUST00000119946ENSMUST00000129848ENSMUST00000131404ENSMUST00000131992ENSMUST00000147922ENSMUST00000148618ENSMUST00000148921ENSMUST00000151449ENSMUSG00000062604ENSMUST00000088392ENSMUSG00000088359ENSMUST00000157734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BH_0001ENSDARG00000029368ENSDART00000021614ENSDART00000155033ENSDARG00000031774ENSDART00000040499ENSDART00000123990CIL_0005BH_0002ENSG00000005483ENST00000257745ENST00000311117ENST00000334877ENST00000334884ENST00000334914ENST00000622386ENSG00000091127ENST00000356362ENST00000469408ENST00000481939ENSG00000135250ENST00000357311ENST00000393651ENST00000466917ENST00000489828ENSG00000201179ENST00000364309ENSG00000213361ENST00000393647ENSG00000244490ENST00000488019ENSG00000270764ENST00000603744ENSG00000271482ENST00000604391CIL_0005BH_0003ENSMUSG00000029004ENSMUST00000094962ENSMUST00000115128ENSMUSG00000057541ENSMUST00000119946ENSMUST00000129848ENSMUST00000131404ENSMUST00000148618ENSMUST00000151449ENSMUSG00000062604ENSMUST00000088392ENSMUSG00000088359ENSMUST00000157734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029368 ENSDART00000021614 N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A
ENSDART00000155033 N/A N/A N/A 17.268±13.27 N/A N/A 1.504±0.55 0.600±0.00 0.062±0.00 N/A 2.335±0.00 N/A N/A N/A
ENSDARG00000031774 ENSDART00000040499 N/A N/A N/A 2.753±0.00 N/A N/A 1.082±0.20 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000123990 N/A N/A N/A N/A N/A N/A 3.003±1.59 3.210±0.00 2.253±0.00 N/A 3.807±0.00 N/A N/A N/A
ENSDART00000153616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005483 ENST00000257745 9.591±0.00 6.105±0.00 N/A N/A 5.062±0.00 7.397±0.00 2.144±0.00 5.617±0.00 1.456±0.00 N/A 4.897±0.00 8.721±3.93 3.342±2.25 9.361±0.00
ENST00000311117 N/A N/A 4.555±0.00 N/A 6.803±0.00 4.280±0.00 N/A 1.779±0.00 6.102±0.00 N/A 1.356±0.00 N/A 1.296±0.00 N/A
ENST00000334877 3.460±0.00 2.790±0.00 N/A 4.706±0.00 3.774±0.08 3.274±0.29 2.041±0.55 1.683±0.48 6.123±0.00 6.090±0.00 N/A 6.994±0.65 N/A N/A
ENST00000334884 N/A N/A N/A N/A N/A N/A N/A N/A 0.606±0.00 N/A N/A 8.346±0.00 N/A N/A
ENST00000334914 N/A N/A 3.585±0.00 N/A N/A N/A 1.746±0.53 N/A N/A 6.108±0.00 3.381±0.00 3.920±0.00 1.087±0.00 N/A
ENST00000468607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622386 N/A N/A N/A N/A 10.520±0.00 N/A N/A N/A N/A N/A N/A 26.837±0.00 14.664±0.00 N/A
ENSG00000091127 ENST00000356362 2.662±0.00 3.279±0.00 0.433±0.00 0.554±0.02 0.976±0.35 0.732±0.52 0.342±0.00 1.468±0.00 1.663±0.00 N/A 2.021±0.00 5.171±2.89 1.593±0.54 2.214±0.07
ENST00000469408 1.576±0.00 0.968±0.00 0.198±0.00 0.468±0.30 0.972±0.32 1.254±0.56 0.374±0.07 0.706±0.00 0.760±0.00 1.042±0.35 1.241±0.00 2.703±1.16 N/A 1.076±0.00
ENST00000478208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481939 N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135250 ENST00000357311 N/A N/A N/A 21.590±0.00 N/A 5.819±0.00 N/A N/A N/A 10.203±0.00 3.343±0.00 N/A N/A N/A
ENST00000393651 7.508±0.00 6.691±0.00 3.736±0.00 39.284±0.00 6.441±0.34 7.131±0.00 4.523±0.00 3.211±0.67 6.367±3.40 7.763±0.00 N/A 9.075±1.60 5.057±1.00 33.931±11.16
ENST00000460391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.245±0.00 N/A N/A N/A
ENST00000474770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489828 N/A N/A N/A 10.740±0.00 N/A N/A 2.541±0.00 N/A N/A N/A N/A N/A 9.094±0.00 67.144±46.97
ENST00000493638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201179 ENST00000364309 N/A 0.740±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213361 ENST00000393647 0.280±0.00 0.923±0.00 N/A 0.855±0.00 0.228±0.00 0.209±0.00 0.101±0.00 0.347±0.00 N/A 0.464±0.00 0.381±0.00 0.349±0.18 N/A 0.287±0.00
ENSG00000244490 ENST00000488019 0.020±0.00 0.145±0.00 N/A 0.243±0.00 0.923±0.00 0.164±0.00 0.039±0.00 N/A N/A 0.679±0.00 N/A 0.079±0.04 0.043±0.00 0.153±0.13
ENSG00000270764 ENST00000603744 N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00
ENSG00000271482 ENST00000604391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.623±0.00 N/A 0.538±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029004 ENSMUST00000094962 9.060±1.92 9.773±2.60 8.746±1.69 17.671±11.87 10.708±3.64 8.049±2.90 4.325±0.78 7.648±1.31 3.759±1.36 12.191±1.72 2.918±1.32 10.015±4.09 3.724±0.97 5.864±0.29
ENSMUST00000115128 1.374±0.17 2.856±0.71 N/A 4.579±0.00 1.467±0.13 2.180±0.41 1.141±0.07 1.730±0.39 0.983±0.14 1.933±0.14 0.942±0.00 1.882±0.14 1.507±0.00 N/A
ENSMUST00000126586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057541 ENSMUST00000119946 4.067±3.00 N/A 9.480±1.62 3.347±0.68 1.687±0.27 1.335±0.37 1.095±0.21 1.861±0.28 5.340±3.93 1.344±0.14 3.685±0.41 3.975±1.60 7.249±3.14 1.000±0.21
ENSMUST00000129848 N/A N/A N/A N/A N/A N/A N/A N/A 1.390±0.00 N/A N/A 5.770±0.00 N/A N/A
ENSMUST00000131404 N/A N/A N/A N/A 1.407±0.00 2.296±0.47 0.959±0.00 2.286±0.00 1.116±0.00 1.215±0.00 N/A 4.648±0.38 N/A N/A
ENSMUST00000131992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148618 N/A N/A N/A 1.117±0.18 N/A N/A N/A N/A N/A N/A N/A 4.583±1.53 N/A N/A
ENSMUST00000148921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.553±0.00 3.214±1.76 1.699±0.00
ENSMUSG00000062604 ENSMUST00000088392 6.035±0.76 N/A 10.829±0.24 23.027±3.95 4.420±0.75 N/A 4.210±0.26 3.776±0.44 2.735±0.82 4.861±0.48 4.004±0.72 6.290±2.57 3.390±0.83 29.005±15.06
ENSMUSG00000088359 ENSMUST00000157734 N/A N/A N/A 29.775±0.00 N/A N/A N/A N/A N/A N/A N/A 92.578±0.00 189.024±47.64 65.998±0.00

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