C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00040X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091127-ENSG00000135249 CGP 9606 7:105439661-105567677
GeneTranscriptPositionBiotype
ENSG00000091127 (PUS7)
pseudouridylate synthase 7 (putative) 		ENST00000356362 (PUS7-002) 105456511-105522258 protein_coding
ENST00000469408 (PUS7-001) 105457659-105522258 protein_coding
ENST00000478208 (PUS7-005) 105470286-105472188 retained_intron
ENST00000481939 (PUS7-003) 105439661-105522267 nonsense_mediated_decay
ENST00000482157 (PUS7-006) 105491586-105508135 protein_coding
ENST00000487277 (PUS7-004) 105491549-105495347 retained_intron
ENSG00000135249 (RINT1)
RAD50 interactor 1 		ENST00000257700 (RINT1-001) 105532085-105567677 protein_coding
ENST00000467392 (RINT1-002) 105532169-105547321 nonsense_mediated_decay
ENST00000474123 (RINT1-007) 105550055-105555363 retained_intron
ENST00000477285 (RINT1-005) 105541601-105542556 processed_transcript
ENST00000482041 (RINT1-004) 105532181-105542457 nonsense_mediated_decay
ENST00000493041 (RINT1-003) 105532184-105546918 protein_coding
ENST00000493258 (RINT1-006) 105542240-105546996 retained_intron
ENST00000497979 (RINT1-008) 105532212-105567676 nonsense_mediated_decay
ENSG00000185055 (EFCAB10)
EF-hand calcium binding domain 10 		ENST00000460135 (EFCAB10-003) 105567195-105581690 protein_coding
ENST00000469099 (EFCAB10-006) 105565120-105591520 processed_transcript
ENST00000480514 (EFCAB10-001) 105565128-105581500 protein_coding
ENST00000485614 (EFCAB10-004) 105565233-105581496 protein_coding
ENST00000486180 (EFCAB10-002) 105566323-105581486 protein_coding
ENST00000490493 (EFCAB10-005) 105567102-105600875 processed_transcript
ENSG00000223886 (RP11-251G23.2)
 ENST00000493920 (RP11-251G23.2-001) 105530209-105530671 processed_pseudogene
CIL_00040X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057541-ENSMUSG00000028999 CGP 10090 5:23740648-23820369
GeneTranscriptPositionBiotype
ENSMUSG00000028999 (Rint1)
RAD50 interactor 1 		ENSMUST00000030852 (Rint1-001) 23787711-23820369 protein_coding
ENSMUST00000112256 (Rint1-006) 23787741-23797057 processed_transcript
ENSMUST00000115113 (Rint1-002) 23787715-23820297 protein_coding
ENSMUST00000117783 (Rint1-005) 23787712-23793900 protein_coding
ENSMUST00000120869 (Rint1-004) 23787711-23790003 protein_coding
ENSMUST00000124680 (Rint1-003) 23787719-23820368 retained_intron
ENSMUST00000132260 (Rint1-007) 23806838-23810170 retained_intron
ENSMUST00000144709 (Rint1-008) 23811766-23815725 processed_transcript
ENSMUSG00000057541 (Pus7)
pseudouridylate synthase 7 homolog (S. cerevisiae) 		ENSMUST00000119946 (Pus7-001) 23740648-23783711 protein_coding
ENSMUST00000129848 (Pus7-007) 23742365-23750112 processed_transcript
ENSMUST00000131404 (Pus7-008) 23743422-23762413 nonsense_mediated_decay
ENSMUST00000131992 (Pus7-002) 23740656-23779558 protein_coding
ENSMUST00000147922 (Pus7-005) 23749378-23762450 processed_transcript
ENSMUST00000148618 (Pus7-003) 23740649-23778411 protein_coding
ENSMUST00000148921 (Pus7-006) 23750531-23754576 processed_transcript
ENSMUST00000151449 (Pus7-004) 23760266-23778378 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040X_0001ENSG00000091127ENST00000356362ENST00000469408ENST00000478208ENST00000481939ENST00000482157ENST00000487277ENSG00000135249ENST00000257700ENST00000467392ENST00000474123ENST00000477285ENST00000482041ENST00000493041ENST00000493258ENST00000497979ENSG00000185055ENST00000460135ENST00000469099ENST00000480514ENST00000485614ENST00000486180ENST00000490493ENSG00000223886ENST00000493920CIL_00040X_0002ENSMUSG00000028999ENSMUST00000030852ENSMUST00000112256ENSMUST00000115113ENSMUST00000117783ENSMUST00000120869ENSMUST00000124680ENSMUST00000132260ENSMUST00000144709ENSMUSG00000057541ENSMUST00000119946ENSMUST00000129848ENSMUST00000131404ENSMUST00000131992ENSMUST00000147922ENSMUST00000148618ENSMUST00000148921ENSMUST00000151449
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040X_0001ENSG00000091127ENST00000356362ENST00000469408ENST00000481939ENSG00000135249ENST00000257700ENST00000467392ENST00000474123ENST00000482041ENST00000497979ENSG00000185055ENST00000460135ENST00000480514ENST00000485614ENST00000486180ENST00000490493ENSG00000223886ENST00000493920CIL_00040X_0002ENSMUSG00000028999ENSMUST00000030852ENSMUST00000112256ENSMUST00000115113ENSMUST00000117783ENSMUST00000120869ENSMUST00000124680ENSMUST00000132260ENSMUSG00000057541ENSMUST00000119946ENSMUST00000129848ENSMUST00000131404ENSMUST00000148618ENSMUST00000151449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091127 ENST00000356362 2.662±0.00 3.279±0.00 0.433±0.00 0.554±0.02 0.976±0.35 0.732±0.52 0.342±0.00 1.468±0.00 1.663±0.00 N/A 2.021±0.00 5.171±2.89 1.593±0.54 2.214±0.07
ENST00000469408 1.576±0.00 0.968±0.00 0.198±0.00 0.468±0.30 0.972±0.32 1.254±0.56 0.374±0.07 0.706±0.00 0.760±0.00 1.042±0.35 1.241±0.00 2.703±1.16 N/A 1.076±0.00
ENST00000478208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481939 N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135249 ENST00000257700 1.165±0.00 N/A N/A 1.158±0.00 1.199±0.50 1.222±0.00 0.781±0.40 0.912±0.00 N/A N/A 2.108±0.00 2.639±1.62 1.651±0.46 3.515±1.15
ENST00000467392 N/A N/A N/A N/A 1.779±0.00 N/A N/A N/A 1.090±0.00 1.631±0.00 1.819±0.00 N/A N/A N/A
ENST00000474123 2.424±0.00 7.806±0.00 N/A 3.354±0.00 2.471±0.13 N/A N/A N/A 1.038±0.00 N/A 0.694±0.00 11.703±0.00 6.495±0.00 12.808±0.00
ENST00000477285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482041 N/A N/A N/A N/A 3.152±0.00 N/A N/A N/A N/A 4.753±0.00 N/A N/A N/A N/A
ENST00000493041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497979 1.391±0.00 4.715±0.00 N/A 1.227±0.00 N/A 1.215±0.25 1.610±0.00 1.745±0.00 1.742±0.00 N/A 2.557±0.00 3.874±0.00 1.157±0.09 2.465±0.00
ENSG00000185055 ENST00000460135 N/A N/A N/A N/A N/A N/A N/A 3.435±0.00 N/A N/A N/A N/A N/A 7.905±0.00
ENST00000469099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.676±0.71
ENST00000485614 N/A N/A N/A N/A N/A N/A N/A 2.521±0.00 N/A N/A N/A N/A N/A 5.591±0.00
ENST00000486180 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.144±0.37 N/A 1.448±0.00 N/A N/A
ENST00000490493 N/A N/A N/A N/A 2.532±0.00 N/A 2.108±0.00 N/A 1.599±0.00 N/A 4.447±0.00 3.042±0.00 N/A 18.390±0.00
ENSG00000223886 ENST00000493920 N/A N/A N/A N/A N/A 0.037±0.00 0.036±0.00 0.194±0.00 N/A N/A 0.237±0.00 0.144±0.00 0.143±0.00 0.199±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028999 ENSMUST00000030852 3.346±0.52 2.268±0.86 2.939±0.25 3.050±1.64 2.297±0.61 2.821±1.42 1.829±0.12 2.924±0.33 4.522±2.10 3.041±0.14 1.203±0.38 3.129±0.89 5.696±0.82 1.525±0.28
ENSMUST00000112256 N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A 0.541±0.05 N/A 2.829±0.00 0.172±0.00
ENSMUST00000115113 N/A 1.363±0.00 N/A 4.746±0.00 N/A N/A N/A N/A N/A N/A N/A 2.589±0.00 7.925±1.41 1.241±0.00
ENSMUST00000117783 N/A 7.330±2.15 N/A N/A N/A 4.637±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120869 N/A N/A N/A N/A 1.775±0.00 N/A N/A N/A N/A 1.521±0.00 N/A N/A N/A N/A
ENSMUST00000124680 0.923±0.00 0.921±0.06 1.412±0.24 1.382±0.01 1.299±0.33 1.127±0.18 N/A N/A 2.668±0.88 N/A 0.402±0.15 1.955±0.77 1.574±0.01 0.534±0.06
ENSMUST00000132260 N/A 6.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057541 ENSMUST00000119946 4.067±3.00 N/A 9.480±1.62 3.347±0.68 1.687±0.27 1.335±0.37 1.095±0.21 1.861±0.28 5.340±3.93 1.344±0.14 3.685±0.41 3.975±1.60 7.249±3.14 1.000±0.21
ENSMUST00000129848 N/A N/A N/A N/A N/A N/A N/A N/A 1.390±0.00 N/A N/A 5.770±0.00 N/A N/A
ENSMUST00000131404 N/A N/A N/A N/A 1.407±0.00 2.296±0.47 0.959±0.00 2.286±0.00 1.116±0.00 1.215±0.00 N/A 4.648±0.38 N/A N/A
ENSMUST00000131992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148618 N/A N/A N/A 1.117±0.18 N/A N/A N/A N/A N/A N/A N/A 4.583±1.53 N/A N/A
ENSMUST00000148921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.553±0.00 3.214±1.76 1.699±0.00

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