C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PR domain containing 2, with ZNF domain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057637 Prdm2 10090 - 4:143107391-143212995 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105778 Prdm2-001 143107391-143212705 protein_coding
  ENSMUST00000134791 Prdm2-002 143162080-143212709 protein_coding
  ENSMUST00000154280 Prdm2-003 143162056-143194735 protein_coding
  ENSMUST00000156909 Prdm2-004 143179345-143212995 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105778 3.676±2.24 3.264±1.50 3.753±1.42 3.445±0.84 3.599±1.24 3.052±1.39 1.175±0.00 3.572±1.29 1.454±0.39 6.889±1.23 2.083±0.72 8.304±3.36 2.914±1.15 6.979±4.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WT CIL_0003WT_0002 CGP 4:142102390-143212995

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076451 prdm2b PR domain containing 2, with ZNF domain b protein_coding Danio_rerio
ENSG00000116731 PRDM2 PR domain containing 2, with ZNF domain protein_coding Homo_sapiens

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