C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 2, with ZNF domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134791 Prdm2-002 ENSMUSG00000057637 10090 - 4:143162080-143212709 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WT CIL_0003WT_0002 CGP 4:142102390-143212995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235372 PRDM2-001 protein_coding Homo_sapiens 0 405
ENST00000311066 PRDM2-201 protein_coding Homo_sapiens 0 405
ENST00000343137 PRDM2-004 protein_coding Homo_sapiens 8e-16 92
ENST00000376048 PRDM2-002 protein_coding Homo_sapiens 0 405
ENST00000407521 PRDM2-014 protein_coding Homo_sapiens 0.00003 53
ENST00000413440 PRDM2-003 protein_coding Homo_sapiens 9e-21 108
ENST00000484063 PRDM2-010 protein_coding Homo_sapiens 0 795
ENST00000491134 PRDM2-007 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000491815 PRDM2-008 retained_intron Homo_sapiens 0.000000000009 75
ENST00000502724 PRDM2-013 processed_transcript Homo_sapiens 0 405
ENST00000502727 PRDM2-012 processed_transcript Homo_sapiens 0 405
ENST00000503842 PRDM2-011 protein_coding Homo_sapiens 0.00001 55
ENST00000505823 PRDM2-015 protein_coding Homo_sapiens 0.00004 53

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