C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003WT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006601-ENSDARG00000076451 CGP 7955 11:26816176-27140673
GeneTranscriptPositionBiotype
ENSDARG00000006601 (KAZN (1 of 3))
kazrin, periplakin interacting protein 		ENSDART00000088888 (KAZN (1 of 3)-201) 26816178-26974154 protein_coding
ENSDART00000144115 (KAZN (1 of 3)-001) 26816176-26974153 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003WT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040606-ENSMUSG00000057637 CGP 10090 4:142102390-143212995
GeneTranscriptPositionBiotype
ENSMUSG00000040606 (Kazn)
kazrin, periplakin interacting protein 		ENSMUST00000036476 (Kazn-001) 142139240-142239401 protein_coding
ENSMUST00000129032 (Kazn-006) 142139243-142210108 protein_coding
ENSMUST00000135922 (Kazn-004) 142112182-142118111 processed_transcript
ENSMUST00000144611 (Kazn-005) 142146770-142154586 retained_intron
ENSMUST00000148812 (Kazn-003) 142139244-142146465 retained_intron
ENSMUST00000155023 (Kazn-002) 142102390-142210206 protein_coding
ENSMUST00000172864 (Kazn-007) 142140808-142210206 protein_coding
ENSMUST00000173068 (Kazn-009) 142118233-142159054 protein_coding
ENSMUST00000174432 (Kazn-008) 142141541-142210206 protein_coding
ENSMUSG00000057637 (Prdm2)
PR domain containing 2, with ZNF domain 		ENSMUST00000105778 (Prdm2-001) 143107391-143212705 protein_coding
ENSMUST00000134791 (Prdm2-002) 143162080-143212709 protein_coding
ENSMUST00000154280 (Prdm2-003) 143162056-143194735 protein_coding
ENSMUST00000156909 (Prdm2-004) 143179345-143212995 processed_transcript
ENSMUSG00000081838 (Gm13038)
predicted gene 13038 		ENSMUST00000119886 (Gm13038-001) 143152572-143153030 processed_pseudogene
ENSMUSG00000083826 (Gm13039)
predicted gene 13039 		ENSMUST00000118638 (Gm13039-001) 143166603-143167396 processed_pseudogene
ENSMUSG00000085816 (Gm13052)
predicted gene 13052 		ENSMUST00000125582 (Gm13052-001) 142307765-142346475 lincRNA
ENSMUSG00000087525 (Gm13062)
predicted gene 13062 		ENSMUST00000151337 (Gm13062-001) 142180602-142184139 antisense
ENSMUSG00000087903 (Gm22039)
predicted gene, 22039 		ENSMUST00000157278 (Gm22039-201) 143204065-143204196 snoRNA
ENSMUSG00000094224 (Gm13018)
predicted gene 13018 		ENSMUST00000178472 (Gm13018-001) 142557390-142557836 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WT_0001ENSDARG00000006601ENSDART00000088888ENSDART00000144115CIL_0003WT_0002ENSMUSG00000040606ENSMUST00000036476ENSMUST00000129032ENSMUST00000135922ENSMUST00000144611ENSMUST00000148812ENSMUST00000155023ENSMUST00000172864ENSMUST00000173068ENSMUST00000174432ENSMUSG00000057637ENSMUST00000105778ENSMUST00000134791ENSMUST00000154280ENSMUST00000156909ENSMUSG00000081838ENSMUST00000119886ENSMUSG00000083826ENSMUST00000118638ENSMUSG00000085816ENSMUST00000125582ENSMUSG00000087525ENSMUST00000151337ENSMUSG00000087903ENSMUST00000157278ENSMUSG00000094224ENSMUST00000178472
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WT_0001ENSDARG00000006601ENSDART00000088888ENSDART00000144115CIL_0003WT_0002ENSMUSG00000040606ENSMUST00000036476ENSMUST00000129032ENSMUST00000144611ENSMUST00000148812ENSMUST00000155023ENSMUST00000172864ENSMUST00000173068ENSMUST00000174432ENSMUSG00000057637ENSMUST00000105778ENSMUSG00000081838ENSMUST00000119886ENSMUSG00000083826ENSMUST00000118638ENSMUSG00000085816ENSMUST00000125582ENSMUSG00000087525ENSMUST00000151337ENSMUSG00000087903ENSMUST00000157278ENSMUSG00000094224ENSMUST00000178472
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006601 ENSDART00000088888 N/A N/A N/A 12.318±0.00 N/A N/A 1.224±0.31 0.488±0.29 0.251±0.00 N/A 1.448±0.00 N/A N/A N/A
ENSDART00000144115 N/A N/A N/A N/A N/A N/A 0.971±0.00 N/A 0.230±0.00 N/A 0.463±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040606 ENSMUST00000036476 2.520±1.30 7.853±0.47 2.619±0.90 3.298±0.41 1.887±0.67 3.848±0.98 0.601±0.28 19.241±2.28 0.208±0.09 7.895±0.94 0.269±0.02 6.282±2.49 9.056±4.01 1.115±0.34
ENSMUST00000129032 0.467±0.00 N/A N/A 4.324±0.00 0.714±0.00 N/A 0.647±0.00 5.923±0.63 0.088±0.03 N/A 0.214±0.05 2.105±0.91 6.266±3.23 0.544±0.00
ENSMUST00000135922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144611 N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A
ENSMUST00000148812 0.358±0.00 N/A 0.865±0.14 1.511±0.00 0.417±0.01 N/A 0.158±0.05 N/A 0.078±0.02 N/A 0.071±0.02 1.766±0.17 1.889±0.00 0.441±0.21
ENSMUST00000155023 1.225±0.31 N/A 0.913±0.20 5.954±0.82 0.649±0.02 0.829±0.13 0.197±0.01 N/A 0.066±0.03 3.212±0.17 0.240±0.09 1.474±0.51 11.718±10.74 0.522±0.21
ENSMUST00000172864 2.588±0.00 N/A 1.801±0.00 6.644±2.77 N/A N/A 0.413±0.04 N/A 0.337±0.11 N/A N/A 4.593±1.04 18.990±7.66 0.752±0.29
ENSMUST00000173068 N/A 7.893±0.00 N/A 35.694±0.00 2.171±0.00 3.545±0.00 N/A N/A 0.380±0.19 8.534±0.00 N/A 11.465±0.00 50.389±0.00 N/A
ENSMUST00000174432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.569±0.37 N/A N/A
ENSMUSG00000057637 ENSMUST00000105778 3.676±2.24 3.264±1.50 3.753±1.42 3.445±0.84 3.599±1.24 3.052±1.39 1.175±0.00 3.572±1.29 1.454±0.39 6.889±1.23 2.083±0.72 8.304±3.36 2.914±1.15 6.979±4.64
ENSMUST00000134791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081838 ENSMUST00000119886 0.792±0.40 1.257±0.24 0.289±0.00 0.824±0.00 1.841±0.54 1.045±0.27 0.460±0.06 0.750±0.32 0.536±0.30 1.173±0.34 N/A 1.282±0.69 0.551±0.08 0.580±0.24
ENSMUSG00000083826 ENSMUST00000118638 0.198±0.05 N/A 0.206±0.00 0.322±0.09 0.224±0.06 0.185±0.00 N/A 0.119±0.08 0.252±0.26 0.132±0.00 0.078±0.00 0.209±0.07 0.236±0.03 0.154±0.04
ENSMUSG00000085816 ENSMUST00000125582 0.055±0.00 N/A 0.025±0.00 0.031±0.00 N/A N/A 0.046±0.00 0.049±0.00 N/A N/A N/A 0.059±0.00 0.542±0.75 0.135±0.09
ENSMUSG00000087525 ENSMUST00000151337 N/A N/A 0.019±0.00 N/A 0.094±0.00 N/A N/A 0.083±0.00 N/A 0.279±0.14 N/A 0.319±0.13 0.205±0.00 0.091±0.00
ENSMUSG00000087903 ENSMUST00000157278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.589±0.00 N/A N/A
ENSMUSG00000094224 ENSMUST00000178472 0.406±0.07 0.634±0.07 0.198±0.09 0.472±0.21 0.122±0.00 0.264±0.00 0.183±0.09 0.556±0.40 0.117±0.06 0.441±0.09 0.151±0.02 1.066±0.70 0.327±0.18 0.284±0.14

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