C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058254 Tspan7 10090 + X:10485158-10596605 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076354 Tspan7-001 10485158-10596605 protein_coding
  ENSMUST00000115526 Tspan7-002 10485158-10596605 protein_coding
  ENSMUST00000149982 Tspan7-003 10485158-10596605 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076354ENSMUST00000115526ENSMUST00000149982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076354 63.777±25.17 31.545±6.59 47.212±3.67 189.319±166.24 48.783±5.67 54.356±2.16 58.612±9.88 41.923±1.71 19.461±6.61 400.724±65.56 40.845±1.91 21.501±4.43 11.579±6.69 1.528±0.62
ENSMUST00000115526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.02
ENSMUST00000149982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 0.025±0.00 0.057±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QH CIL_0005QH_0002 CGP X:10252305-10596605
CIL_0005QI CIL_0005QI_0002 CGP X:10485158-10719690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008407 tspan7b tetraspanin 7b protein_coding Danio_rerio
ENSG00000156298 TSPAN7 tetraspanin 7 protein_coding Homo_sapiens

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