C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078673 Samd12-001 ENSMUSG00000058656 10090 - 15:53461801-53902530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078673
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078673 0.768±0.28 0.303±0.05 0.202±0.10 1.179±0.58 0.356±0.20 0.431±0.13 0.051±0.05 1.085±0.00 0.112±0.01 1.288±0.42 0.216±0.14 0.055±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0002 CGP 15:53064038-53902537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314727 SAMD12-001 protein_coding Homo_sapiens 0 835
ENST00000409003 SAMD12-201 protein_coding Homo_sapiens 0 1158
ENST00000445741 SAMD12-005 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000453675 SAMD12-006 protein_coding Homo_sapiens 0 377
ENST00000524796 SAMD12-003 protein_coding Homo_sapiens 0 658
ENST00000526328 SAMD12-002 protein_coding Homo_sapiens 0 821
ENST00000526765 SAMD12-004 protein_coding Homo_sapiens 0 597

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