C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132059 Samd12-004 ENSMUSG00000058656 10090 - 15:53462194-53902381 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverMuscleOvaryPlacentaTestisENSMUST00000132059
Transcript ID Adrenal Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000132059 0.622±0.00 12.027±0.00 0.024±0.00 0.240±0.00 1.807±0.12 2.291±0.16 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0002 CGP 15:53064038-53902537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314727 SAMD12-001 protein_coding Homo_sapiens 0 272
ENST00000409003 SAMD12-201 protein_coding Homo_sapiens 0 272
ENST00000445741 SAMD12-005 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000453675 SAMD12-006 protein_coding Homo_sapiens 0 252
ENST00000526328 SAMD12-002 protein_coding Homo_sapiens 0 272
ENST00000526765 SAMD12-004 protein_coding Homo_sapiens 0 252

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