C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ectodysplasin-A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059327 Eda 10090 + X:99975606-100400762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071453 Eda-201 99975781-100397156 protein_coding
  ENSMUST00000113775 Eda-003 99975606-100400760 protein_coding
  ENSMUST00000113776 Eda-002 99975606-100400760 protein_coding
  ENSMUST00000113777 Eda-202 99975781-100395812 protein_coding
  ENSMUST00000113778 Eda-005 99975606-100400762 protein_coding
  ENSMUST00000113779 Eda-001 99975606-100400760 protein_coding
  ENSMUST00000113780 Eda-004 99975606-100400762 protein_coding
  ENSMUST00000113781 Eda-006 99975606-100400759 protein_coding
  ENSMUST00000113783 Eda-011 99975606-100400759 protein_coding
  ENSMUST00000123547 Eda-009 100387255-100395036 processed_transcript
  ENSMUST00000134582 Eda-010 99975606-100311299 retained_intron
  ENSMUST00000145063 Eda-008 100385143-100394438 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113776ENSMUST00000113777ENSMUST00000113778ENSMUST00000113779ENSMUST00000113780ENSMUST00000113781ENSMUST00000113783ENSMUST00000134582ENSMUST00000145063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113776 N/A 0.237±0.00 N/A N/A N/A 0.189±0.04 0.266±0.00 0.076±0.00 0.132±0.00 N/A N/A 0.260±0.00 N/A N/A
ENSMUST00000113777 N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A 0.184±0.08 N/A
ENSMUST00000113778 0.711±0.00 1.056±0.20 0.441±0.00 0.287±0.06 0.905±0.17 0.167±0.00 0.375±0.01 0.191±0.13 0.161±0.03 0.181±0.10 0.286±0.17 0.790±0.37 0.418±0.37 0.067±0.04
ENSMUST00000113779 1.226±0.39 1.164±0.20 0.589±0.00 0.439±0.05 N/A N/A 0.220±0.00 0.068±0.00 0.251±0.11 0.144±0.00 0.396±0.00 0.340±0.09 0.132±0.02 0.162±0.00
ENSMUST00000113780 0.281±0.00 0.561±0.33 N/A 0.225±0.00 N/A 0.314±0.10 N/A 0.055±0.00 N/A 0.273±0.13 0.199±0.02 0.232±0.12 0.097±0.00 0.039±0.00
ENSMUST00000113781 0.549±0.00 N/A N/A N/A 0.227±0.00 N/A 0.111±0.00 0.123±0.04 0.598±0.00 0.261±0.16 0.172±0.00 0.413±0.26 N/A 0.072±0.05
ENSMUST00000113783 0.424±0.00 N/A N/A N/A N/A N/A 0.249±0.00 0.082±0.01 0.242±0.00 N/A 0.331±0.13 0.113±0.00 N/A N/A
ENSMUST00000134582 N/A 0.786±0.00 N/A N/A 0.783±0.00 0.204±0.07 N/A N/A N/A N/A N/A 0.889±0.42 N/A N/A
ENSMUST00000145063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YI CIL_0000YI_0003 CGP X:99821021-100400762
CIL_0002RK CIL_0002RK_0002 CGP X:99975606-100442717

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001942 IGI hair follicle development
GO:0005102 IEA receptor binding
GO:0005164 IEA tumor necrosis factor receptor binding
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen trimer
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006955 IEA immune response
GO:0007160 IDA cell-matrix adhesion
GO:0010467 IMP gene expression
GO:0030154 IEA cell differentiation
GO:0042346 IDA positive regulation of NF-kappaB import into nucleus
GO:0042475 IMP odontogenesis of dentin-containing tooth
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043473 IMP pigmentation
GO:0043588 IMP skin development
GO:0045177 IDA apical part of cell
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0060662 IDA salivary gland cavitation
GO:0060789 IGI hair follicle placode formation
GO:0061153 IMP trachea gland development
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074591 eda ectodysplasin A protein_coding Danio_rerio
ENSG00000158813 EDA ectodysplasin A protein_coding Homo_sapiens

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