| Transcript ID | Brain | Liver |
|---|---|---|
| ENSMUST00000120638 | 6.928±3.99 | 0.491±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | synapsin III | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000059602  |
Syn3 | 10090 | - |
10:86055125-86498896  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000120638 |
Syn3-001 | 86055125-86498856 | protein_coding | ||
| ENSMUST00000121789 |
Syn3-005 | 86291593-86498882 | protein_coding | ||
| ENSMUST00000123783 |
Syn3-003 | 86347774-86491897 | retained_intron | ||
| ENSMUST00000139197 |
Syn3-004 | 86351145-86498896 | retained_intron | ||
| ENSMUST00000143319 |
Syn3-006 | 86057423-86066843 | processed_transcript | ||
| ENSMUST00000145864 |
Syn3-002 | 86070502-86491897 | retained_intron | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007RH | CIL_0007RH_0002 | VISTA | 10:85994227-86597417 |
| CIL_0002NM | CIL_0002NM_0002 | CGP | 10:86021972-86498896 |
| CIL_000337 | CIL_000337_0002 | CGP | 10:86055125-86498896 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0005515 | IEA | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0007269 | IEA | neurotransmitter secretion |
| GO:0008021 | IEA | synaptic vesicle |
| GO:0008152 | IEA | metabolic process |
| GO:0030054 | IEA | cell junction |
| GO:0030672 | IDA | synaptic vesicle membrane |
| GO:0045202 | IDA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000090196
|
synapsin III | protein_coding | Danio_rerio | ||
|
ENSG00000185666
|
SYN3 | synapsin III | protein_coding | Homo_sapiens | |
