C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | synapsin III | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000185666  |
SYN3 | 9606 | - |
22:32512552-33058372  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000332840 |
SYN3-201 | 32513692-32541716 | protein_coding | ||
| ENST00000358763 |
SYN3-001 | 32512552-33058372 | protein_coding | ||
| ENST00000412575 |
SYN3-008 | 32980673-33014529 | protein_coding | ||
| ENST00000441821 |
SYN3-009 | 32980645-33057858 | protein_coding | ||
| ENST00000459990 |
SYN3-011 | 32518052-32530202 | processed_transcript | ||
| ENST00000461446 |
SYN3-006 | 32514439-32529082 | retained_intron | ||
| ENST00000462268 |
SYN3-002 | 32629606-32869100 | processed_transcript | ||
| ENST00000467095 |
SYN3-007 | 32513675-32519686 | processed_transcript | ||
| ENST00000467824 |
SYN3-003 | 32864575-32869058 | retained_intron | ||
| ENST00000468922 |
SYN3-004 | 32518193-32530188 | processed_transcript | ||
| ENST00000472027 |
SYN3-010 | 32930995-32947579 | retained_intron | ||
| ENST00000483062 |
SYN3-005 | 32513576-32529071 | retained_intron | ||
| ENST00000619146 |
SYN3-202 | 32527672-32541716 | protein_coding | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002NM | CIL_0002NM_0001 | CGP | 22:32474676-33058372 |
| CIL_0007RH | CIL_0007RH_0001 | VISTA | 22:32494872-33098241 |
| CIL_000337 | CIL_000337_0001 | CGP | 22:32512552-33058372 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0005515 | IEA | protein binding |
| GO:0005524 | TAS | ATP binding |
| GO:0007269 | IEA | neurotransmitter secretion |
| GO:0008021 | TAS | synaptic vesicle |
| GO:0008152 | IEA | metabolic process |
| GO:0030054 | IEA | cell junction |
| GO:0030672 | IEA | synaptic vesicle membrane |
| GO:0032228 | TAS | regulation of synaptic transmission, GABAergic |
| GO:0045202 | IEA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000090196
|
synapsin III | protein_coding | Danio_rerio | ||
|
ENSMUSG00000059602
|
Syn3 | synapsin III | protein_coding | Mus_musculus | |
