C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synapsin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123783 Syn3-003 ENSMUSG00000059602 10090 - 10:86347774-86491897 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RH CIL_0007RH_0002 VISTA 10:85994227-86597417
CIL_0002NM CIL_0002NM_0002 CGP 10:86021972-86498896
CIL_000337 CIL_000337_0002 CGP 10:86055125-86498896

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266085 TIMP3-001 protein_coding Homo_sapiens 0 320
ENST00000358763 SYN3-001 protein_coding Homo_sapiens 0 846
ENST00000412575 SYN3-008 protein_coding Homo_sapiens 0 368
ENST00000441821 SYN3-009 protein_coding Homo_sapiens 0 403

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