C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 4A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059796 Eif4a1 10090 - 11:69666936-69672423 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102589 Eif4a1-013 69668482-69672423 nonsense_mediated_decay
  ENSMUST00000123995 Eif4a1-002 69666937-69672317 retained_intron
  ENSMUST00000127677 Eif4a1-008 69670180-69671730 processed_transcript
  ENSMUST00000128519 Eif4a1-012 69666936-69672317 retained_intron
  ENSMUST00000129295 Eif4a1-005 69670469-69671450 retained_intron
  ENSMUST00000133067 Eif4a1-009 69667453-69668289 processed_transcript
  ENSMUST00000139299 Eif4a1-006 69669155-69672316 processed_transcript
  ENSMUST00000140186 Eif4a1-011 69667382-69668063 processed_transcript
  ENSMUST00000140310 Eif4a1-007 69669163-69670883 processed_transcript
  ENSMUST00000142214 Eif4a1-003 69670133-69672315 processed_transcript
  ENSMUST00000142348 Eif4a1-010 69667222-69668237 processed_transcript
  ENSMUST00000145289 Eif4a1-004 69670248-69671222 retained_intron
  ENSMUST00000163666 Eif4a1-001 69666936-69672317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102589ENSMUST00000123995ENSMUST00000133067ENSMUST00000163666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102589 103.248±33.04 72.979±12.30 N/A 237.316±0.00 88.518±8.30 84.212±12.95 40.776±4.40 46.014±5.11 78.815±20.38 69.567±2.32 N/A 150.124±34.04 N/A 53.664±4.06
ENSMUST00000123995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.279±0.00 N/A N/A
ENSMUST00000133067 N/A N/A N/A 25.959±0.00 N/A N/A N/A N/A N/A N/A N/A 68.951±0.00 77.108±32.17 6.428±0.00
ENSMUST00000163666 95.196±21.31 10.344±1.16 224.251±3.92 201.618±118.38 30.206±7.56 38.099±16.91 21.332±6.27 38.715±6.28 183.392±167.72 53.335±21.77 41.306±3.56 91.712±84.06 246.449±119.22 29.184±9.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006413 IEA translational initiation
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IEA membrane
GO:0031100 IEA organ regeneration
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161960 EIF4A1 eukaryotic translation initiation factor 4A1 protein_coding Homo_sapiens

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