C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102589 Eif4a1-013 ENSMUSG00000059796 10090 - 11:69668482-69672423 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000102589
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000102589 103.248±33.04 72.979±12.30 237.316±0.00 88.518±8.30 84.212±12.95 40.776±4.40 46.014±5.11 78.815±20.38 69.567±2.32 150.124±34.04 53.664±4.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 0 453
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 0 453
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 996
ENST00000394444 EIF4A1P8-001 processed_pseudogene Homo_sapiens 0 741
ENST00000396527 EIF4A1-003 retained_intron Homo_sapiens 0 200
ENST00000421800 EIF4A1P7-001 processed_pseudogene Homo_sapiens 0 773
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 889
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 728
ENST00000428832 EIF4A1P10-001 processed_pseudogene Homo_sapiens 0 894
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 750
ENST00000550578 RP11-1136G11.6-001 processed_pseudogene Homo_sapiens 0 848
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 981
ENST00000577731 EIF4A1-034 retained_intron Homo_sapiens 0 577
ENST00000577738 EIF4A1-016 retained_intron Homo_sapiens 0 459
ENST00000577929 EIF4A1-018 protein_coding Homo_sapiens 0 412
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 942
ENST00000578476 EIF4A1-014 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000578495 EIF4A1-026 protein_coding Homo_sapiens 0 963
ENST00000578754 EIF4A1-023 protein_coding Homo_sapiens 0 200
ENST00000579085 EIF4A1-019 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000579139 EIF4A1-013 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000580461 EIF4A1-002 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000580886 EIF4A1-012 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000580888 EIF4A1-038 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000581384 EIF4A1-037 protein_coding Homo_sapiens 0 837
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000581770 EIF4A1-015 protein_coding Homo_sapiens 0 335
ENST00000582169 EIF4A1-024 protein_coding Homo_sapiens 0 638
ENST00000582213 EIF4A1-021 retained_intron Homo_sapiens 0 379
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 0 972
ENST00000582848 EIF4A1-027 retained_intron Homo_sapiens 0 715
ENST00000583389 EIF4A1-031 protein_coding Homo_sapiens 0 475
ENST00000583802 EIF4A1-022 protein_coding Homo_sapiens 0 741
ENST00000583899 EIF4A1-020 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000584054 EIF4A1-011 retained_intron Homo_sapiens 0 322
ENST00000584712 EIF4A1-036 retained_intron Homo_sapiens 0 512
ENST00000584784 EIF4A1-028 protein_coding Homo_sapiens 0 896
ENST00000584798 EIF4A1-010 retained_intron Homo_sapiens 0 200
ENST00000584860 EIF4A1-017 protein_coding Homo_sapiens 0 942
ENST00000584901 EIF4A1-006 retained_intron Homo_sapiens 0 749
ENST00000585024 EIF4A1-025 protein_coding Homo_sapiens 0 800
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 1144

Loading