C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123995 Eif4a1-002 ENSMUSG00000059796 10090 - 11:69666937-69672317 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000123995
Transcript ID Ovary
ENSMUST00000123995 10.279±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 4.00001e-41 174
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 4.00001e-41 174
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 763
ENST00000394444 EIF4A1P8-001 processed_pseudogene Homo_sapiens 0 361
ENST00000396527 EIF4A1-003 retained_intron Homo_sapiens 0 222
ENST00000411521 EIF4A1P3-001 processed_pseudogene Homo_sapiens 0 265
ENST00000421800 EIF4A1P7-001 processed_pseudogene Homo_sapiens 0 577
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 617
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 475
ENST00000428832 EIF4A1P10-001 processed_pseudogene Homo_sapiens 0 632
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 492
ENST00000451239 EIF4A1P11-001 processed_pseudogene Homo_sapiens 0 272
ENST00000550578 RP11-1136G11.6-001 processed_pseudogene Homo_sapiens 0 568
ENST00000576035 EIF4A1P9-001 processed_pseudogene Homo_sapiens 0 196
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 409
ENST00000577731 EIF4A1-034 retained_intron Homo_sapiens 0 409
ENST00000577738 EIF4A1-016 retained_intron Homo_sapiens 0 265
ENST00000577929 EIF4A1-018 protein_coding Homo_sapiens 0 265
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 446
ENST00000578476 EIF4A1-014 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000578495 EIF4A1-026 protein_coding Homo_sapiens 0 398
ENST00000578569 EIF4A1-029 retained_intron Homo_sapiens 0 322
ENST00000578754 EIF4A1-023 protein_coding Homo_sapiens 0 200
ENST00000579085 EIF4A1-019 retained_intron Homo_sapiens 0 189
ENST00000579139 EIF4A1-013 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000580461 EIF4A1-002 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000580886 EIF4A1-012 retained_intron Homo_sapiens 0 191
ENST00000580888 EIF4A1-038 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000581384 EIF4A1-037 protein_coding Homo_sapiens 0 385
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000581770 EIF4A1-015 protein_coding Homo_sapiens 0 265
ENST00000581841 EIF4A1-035 retained_intron Homo_sapiens 0 324
ENST00000582050 EIF4A1-032 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000582169 EIF4A1-024 protein_coding Homo_sapiens 0 207
ENST00000582213 EIF4A1-021 retained_intron Homo_sapiens 0 207
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 0 409
ENST00000582848 EIF4A1-027 retained_intron Homo_sapiens 0 315
ENST00000583217 EIF4A1-030 retained_intron Homo_sapiens 0 198
ENST00000583389 EIF4A1-031 protein_coding Homo_sapiens 0 394
ENST00000583802 EIF4A1-022 protein_coding Homo_sapiens 0 368
ENST00000583899 EIF4A1-020 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000584054 EIF4A1-011 retained_intron Homo_sapiens 0 322
ENST00000584712 EIF4A1-036 retained_intron Homo_sapiens 0 318
ENST00000584784 EIF4A1-028 protein_coding Homo_sapiens 0 407
ENST00000584798 EIF4A1-010 retained_intron Homo_sapiens 0 211
ENST00000584860 EIF4A1-017 protein_coding Homo_sapiens 0 409
ENST00000584901 EIF4A1-006 retained_intron Homo_sapiens 0 315
ENST00000585024 EIF4A1-025 protein_coding Homo_sapiens 0 331
ENST00000603184 RP11-175E9.2-001 processed_pseudogene Homo_sapiens 0 276
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 763

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