C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, class II antigen E beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060586 H2-Eb1 10090 + 17:34305877-34316199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074557 H2-Eb1-001 34305877-34316199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074557 142.042±15.13 46.756±3.23 104.758±4.85 0.481±0.21 346.083±25.67 83.141±3.07 30.137±12.17 77.564±12.94 11.018±10.64 163.930±22.45 11.507±11.28 78.211±14.65 4.181±6.66 3.169±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PL CIL_0001PL_000A CGP 17:34282744-34316199
CIL_0001PK CIL_0001PK_0007 CGP 17:34305877-34340229

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0019886 IDA antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0042613 IEA MHC class II protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041705 si:busm1-228j01.6 si:busm1-228j01.6 protein_coding Danio_rerio
ENSDARG00000053738 si:dkey-33b17.3 si:dkey-33b17.3 protein_coding Danio_rerio
ENSDARG00000054921 wu:fd58b11 wu:fd58b11 protein_coding Danio_rerio
ENSDARG00000055447 si:busm1-194e12.12 si:busm1-194e12.12 protein_coding Danio_rerio
ENSDARG00000056330 mhc2dbb major histocompatibility complex class II DBB gene protein_coding Danio_rerio
ENSDARG00000074510 si:busm1-104n07.3 si:busm1-104n07.3 protein_coding Danio_rerio
ENSDARG00000076307 si:zfos-2070c2.3 si:zfos-2070c2.3 protein_coding Danio_rerio
ENSDARG00000079105 mhc2dab major histocompatibility complex class II DAB gene protein_coding Danio_rerio
ENSDARG00000088872 si:busm1-228j01.4 si:busm1-228j01.4 protein_coding Danio_rerio
ENSDARG00000093706 si:dkey-33b17.3 si:dkey-33b17.3 protein_coding Danio_rerio
ENSG00000196126 HLA-DRB1 major histocompatibility complex, class II, DR beta 1 protein_coding Homo_sapiens
ENSG00000198502 HLA-DRB5 major histocompatibility complex, class II, DR beta 5 protein_coding Homo_sapiens

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