C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H3 histone, family 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060743 H3f3a 10090 - 1:180800832-180813943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081026 H3f3a-006 180802697-180813547 protein_coding
  ENSMUST00000159441 H3f3a-005 180809748-180813603 retained_intron
  ENSMUST00000159685 H3f3a-004 180810241-180813603 protein_coding
  ENSMUST00000159789 H3f3a-007 180803131-180813534 protein_coding
  ENSMUST00000161308 H3f3a-001 180800832-180813632 protein_coding
  ENSMUST00000162118 H3f3a-002 180810233-180813603 protein_coding
  ENSMUST00000162814 H3f3a-003 180803024-180813943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081026ENSMUST00000159441ENSMUST00000159789ENSMUST00000162814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081026 N/A N/A N/A N/A N/A 27.846±0.00 N/A N/A 13.517±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159441 N/A 68.427±6.17 N/A N/A 106.613±4.11 120.482±33.36 N/A 75.291±0.00 40.498±5.41 75.855±40.31 N/A 170.759±64.41 N/A 84.508±13.15
ENSMUST00000159789 N/A 25.123±2.18 N/A 33.858±0.00 55.902±18.15 44.678±5.09 N/A 33.981±0.00 20.461±3.22 45.509±0.00 N/A 144.450±60.60 46.450±0.00 N/A
ENSMUST00000162814 95.426±5.57 N/A 270.692±32.11 453.770±18.69 58.463±28.40 39.077±0.00 66.276±5.40 70.937±32.14 370.642±317.16 53.050±28.46 111.567±15.19 100.577±97.01 144.179±48.63 60.959±24.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0007420 IEA brain development
GO:0009725 IEA response to hormone
GO:0046982 IEA protein heterodimerization activity

Homologs

No Homologs available.

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