C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162814 H3f3a-003 ENSMUSG00000060743 10090 - 1:180803024-180813943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162814
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162814 95.426±5.57 270.692±32.11 453.770±18.69 58.463±28.40 39.077±0.00 66.276±5.40 70.937±32.14 370.642±317.16 53.050±28.46 111.567±15.19 100.577±97.01 144.179±48.63 60.959±24.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 654
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 606
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 760
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 601
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 876
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 876
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 671
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 614
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 551
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 481
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 623
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 590
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 444
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 562
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 486
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 351
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 9e-39 163
ENST00000619270 CTD-2062A1.2-001 processed_pseudogene Homo_sapiens 0 272

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