C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: B cell linker
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061132 Blnk 10090 - 19:40928927-40994535 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054769 Blnk-001 40928927-40994535 protein_coding
  ENSMUST00000117695 Blnk-002 40928927-40994148 protein_coding
  ENSMUST00000134568 Blnk-003 40964605-40994535 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054769ENSMUST00000117695ENSMUST00000134568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054769 2.041±0.86 0.120±0.00 1.679±0.42 0.041±0.02 3.775±1.93 15.728±1.52 0.456±0.30 2.784±0.36 0.349±0.28 1.297±0.28 0.499±0.40 1.991±0.50 0.753±0.98 0.306±0.09
ENSMUST00000117695 1.652±1.01 0.686±0.24 2.175±0.02 0.816±1.00 5.595±2.46 12.355±2.47 0.602±0.42 5.051±0.49 0.385±0.21 1.887±0.25 0.633±0.38 2.688±0.88 1.784±2.91 0.554±0.25
ENSMUST00000134568 N/A N/A N/A N/A 0.300±0.00 N/A 0.034±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C3 CIL_0001C3_0003 CGP 19:40894705-40994535
CIL_0001C1 CIL_0001C1_0003 CGP 19:40928927-41059523

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 IEA SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0009967 IEA positive regulation of signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0042113 IEA B cell activation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042722 blnk B-cell linker protein_coding Danio_rerio
ENSG00000095585 BLNK B-cell linker protein_coding Homo_sapiens

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