C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell linker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054769 Blnk-001 ENSMUSG00000061132 10090 - 19:40928927-40994535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054769 2.041±0.86 0.120±0.00 1.679±0.42 0.041±0.02 3.775±1.93 15.728±1.52 0.456±0.30 2.784±0.36 0.349±0.28 1.297±0.28 0.499±0.40 1.991±0.50 0.753±0.98 0.306±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C3 CIL_0001C3_0003 CGP 19:40894705-40994535
CIL_0001C1 CIL_0001C1_0003 CGP 19:40928927-41059523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005070 IEA SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0009967 IEA positive regulation of signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0042113 IEA B cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000224337 BLNK-001 protein_coding Homo_sapiens 0 1336
ENST00000371176 BLNK-002 protein_coding Homo_sapiens 0 673
ENST00000413476 BLNK-201 protein_coding Homo_sapiens 0 1042
ENST00000427367 BLNK-202 protein_coding Homo_sapiens 0 387
ENST00000467799 BLNK-004 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000472763 BLNK-005 retained_intron Homo_sapiens 0 322
ENST00000495266 BLNK-003 protein_coding Homo_sapiens 0 219

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