C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell linker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117695 Blnk-002 ENSMUSG00000061132 10090 - 19:40928927-40994148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117695 1.652±1.01 0.686±0.24 2.175±0.02 0.816±1.00 5.595±2.46 12.355±2.47 0.602±0.42 5.051±0.49 0.385±0.21 1.887±0.25 0.633±0.38 2.688±0.88 1.784±2.91 0.554±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C3 CIL_0001C3_0003 CGP 19:40894705-40994535
CIL_0001C1 CIL_0001C1_0003 CGP 19:40928927-41059523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000224337 BLNK-001 protein_coding Homo_sapiens 0 1301
ENST00000371176 BLNK-002 protein_coding Homo_sapiens 0 673
ENST00000413476 BLNK-201 protein_coding Homo_sapiens 0 1007
ENST00000427367 BLNK-202 protein_coding Homo_sapiens 0 387
ENST00000467799 BLNK-004 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000472763 BLNK-005 retained_intron Homo_sapiens 0 322
ENST00000495266 BLNK-003 protein_coding Homo_sapiens 0 219

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