C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076697 Slc38a10-003 ENSMUSG00000061306 10090 - 11:120118872-120151346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000076697
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000076697 22.003±0.88 15.781±0.91 36.817±10.08 15.641±3.81 23.172±2.34 8.739±1.51 28.111±5.39 40.976±8.28 10.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346
CIL_0005H6 CIL_0005H6_0002 CGP 11:120103960-120292296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane
GO:0060348 IMP bone development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288439 SLC38A10-002 protein_coding Homo_sapiens 0 1317
ENST00000374759 SLC38A10-001 protein_coding Homo_sapiens 0 1317
ENST00000539748 SLC38A10-006 protein_coding Homo_sapiens 0 494
ENST00000540233 SLC38A10-007 processed_transcript Homo_sapiens 0 270

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