C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045402 Slc38a10-004 ENSMUSG00000061306 10090 - 11:120103960-120151346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045402
Transcript ID Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045402 3.293±0.00 4.078±0.00 4.808±0.00 6.707±0.00 2.961±0.76 5.991±0.00 1.050±0.00 6.809±1.80 3.946±0.22 4.160±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346
CIL_0005H6 CIL_0005H6_0002 CGP 11:120103960-120292296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane
GO:0060348 IMP bone development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126420 slc38a10-201 protein_coding Danio_rerio 2e-20 106
ENSDART00000153097 slc38a10-001 protein_coding Danio_rerio 2e-20 106
ENST00000288439 SLC38A10-002 protein_coding Homo_sapiens 0 1607
ENST00000374759 SLC38A10-001 protein_coding Homo_sapiens 0 1607
ENST00000539748 SLC38A10-006 protein_coding Homo_sapiens 0 494
ENST00000540233 SLC38A10-007 processed_transcript Homo_sapiens 0 270

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