C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L34
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062006 Rpl34 10090 - 3:130726831-130730398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062601 Rpl34-001 130726831-130730337 protein_coding
  ENSMUST00000079085 Rpl34-002 130726839-130730398 protein_coding
  ENSMUST00000133802 Rpl34-003 130728332-130730334 retained_intron
  ENSMUST00000135691 Rpl34-004 130726864-130730342 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062601ENSMUST00000079085
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062601 N/A 47.235±6.00 N/A 11.342±0.00 N/A N/A N/A N/A 20.286±1.40 N/A 20.493±0.02 N/A 24.441±0.00 5.334±0.00
ENSMUST00000079085 888.705±319.13 144.096±15.76 1021.920±21.04 364.948±313.99 634.346±85.39 697.426±38.64 301.380±57.17 612.515±32.65 696.863±515.91 553.883±33.57 231.381±25.16 948.174±196.81 636.341±409.73 411.882±181.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PU CIL_0008PU_0002 VISTA 3:130139552-130741737
CIL_000872 CIL_000872_0002 VISTA 3:130437080-131038563
CIL_0008T5 CIL_0008T5_0002 VISTA 3:130661754-131264427

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029500 rpl34 ribosomal protein L34 protein_coding Danio_rerio
ENSG00000109475 RPL34 ribosomal protein L34 protein_coding Homo_sapiens

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